Protein Family : Eukaryotic rpb5 RNA polymerase subunit family protein 123424632

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  116

116 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29912.t000208 (1 of 3) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) R. communis v0.1 2385   29912: 1348732-1351116
Cucsa.388310 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. sativus v1.0 3457   scaffold03967: 754992-758448
orange1.1g030833m.g (1 of 3) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. sinensis v1.1 3311   scaffold00027: 148543-151853
AT3G22320 (1 of 5) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) A. thaliana TAIR10 NRPB5 1484   Chr3: 7890864-7892347
AT3G16680 (1 of 6) PF01191 - RNA polymerase Rpb5, C-terminal domain (RNA_pol_Rpb5_C) A. thaliana TAIR10 910   Chr3: 5683336-5684245
Thhalv10017724m.g (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED E. salsugineum v1.0 1425   scaffold_10: 11169891-11171315
Thhalv10021534m.g (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 E. salsugineum v1.0 1506   scaffold_13: 1145859-1147364
Ciclev10009504m.g (1 of 3) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. clementina v1.0 5157   scaffold_1: 6903804-6908960
Lus10001335.g (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 L. usitatissimum v1.0 1382   scaffold2292: 64009-65390
Lus10013639.g (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 L. usitatissimum v1.0 1373   scaffold317: 216014-217386
Gorai.001G007200 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. raimondii v2.1 3051   Chr01: 639924-642974
Gorai.004G280900 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. raimondii v2.1 3546   Chr04: 61270379-61273924
estExt_Genewise1.C_80161 (1 of 1) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. subellipsoidea C-169 v2.0 2186   scaffold_8: 848870-851055
fgenesh2_kg_8_num_93_num_4275441:1 (1 of 1) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 M. pusilla CCMP1545 v3.0 827   scaffold_8: 898486-899312
fgenesh2_pm.C_Chr_11000022 (1 of 1) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 M. sp RCC299 v3.0 615   Chr_11: 293862-294476
e_gwEuk.4.529.1 (1 of 1) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 O. lucimarinus v2.0 618   Chr_4: 836941-837558
Thecc1EG037836 (1 of 4) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) T. cacao v1.1 2490   scaffold_9: 5563993-5566482
Migut.J01678 (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED M. guttatus v2.0 1198   scaffold_10: 18147301-18148498
Migut.C00444 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 M. guttatus v2.0 2575   scaffold_3: 11148529-11151103
Araha.16357s0001 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 A. halleri v1.1 1077   Scaffold16357: 3-1079
Cagra.1189s0008 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. grandiflora v1.1 1354   Scaffold1189: 21837-23190
Glyma.07G084000 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. max Wm82.a2.v1 2130   Chr07: 7748101-7750230
Glyma.09G192900 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. max Wm82.a2.v1 1791   Chr09: 41744439-41746229
Glyma.04G141500 (1 of 2) PTHR10535:SF5 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5C G. max Wm82.a2.v1 2890   Chr04: 23838512-23841401
Brara.C03870 (1 of 7) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 B. rapa FPsc v1.3 1484   A03: 20067643-20069126
Bostr.0556s0441 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 B. stricta v1.2 392   Scaffold556: 2614571-2614962
Bostr.11568s0048 (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED B. stricta v1.2 3290   Scaffold11568: 308051-311340
Bostr.19424s0424 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 B. stricta v1.2 1556   Scaffold19424: 3830186-3831741
Cre09.g403219 (1 of 1) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) C. reinhardtii v5.6 RPB5 3440   chromosome_9: 6071586-6075025
Medtr5g005470 (1 of 9) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 M. truncatula Mt4.0v1 3450   chr5: 465125-468574

116 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29912.m005482 R. communis v0.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Cucsa.388310.1 C. sativus v1.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
orange1.1g030833m C. sinensis v1.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
AT3G16680.1 A. thaliana TAIR10 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
AT3G22320.1 A. thaliana TAIR10 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Thhalv10021534m E. salsugineum v1.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Thhalv10017724m E. salsugineum v1.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Ciclev10009504m C. clementina v1.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Lus10001335 L. usitatissimum v1.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Lus10013639 L. usitatissimum v1.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Gorai.004G280900.1 G. raimondii v2.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Gorai.001G007200.1 G. raimondii v2.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
23738 C. subellipsoidea C-169 v2.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
123662 M. pusilla CCMP1545 v3.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
98039 M. sp RCC299 v3.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
36865 O. lucimarinus v2.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Thecc1EG037836t1 T. cacao v1.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Migut.J01678.1.p M. guttatus v2.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Migut.C00444.1.p M. guttatus v2.0 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5275 Viridiplantae
Araha.16357s0001.1.p A. halleri v1.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Cagra.1189s0008.1.p C. grandiflora v1.1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Glyma.04G141500.1.p G. max Wm82.a2.v1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5275 Viridiplantae
Glyma.07G084000.1.p G. max Wm82.a2.v1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5275 Viridiplantae
Glyma.09G192900.1.p G. max Wm82.a2.v1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5275 Viridiplantae
Brara.C03870.1.p B. rapa FPsc v1.3 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Bostr.19424s0424.1.p B. stricta v1.2 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5275 Viridiplantae
Bostr.0556s0441.1.p B. stricta v1.2 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5275 Viridiplantae
Bostr.11568s0048.1.p B. stricta v1.2 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5275 Viridiplantae
Cre09.g403219.t1.1 C. reinhardtii v5.6 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae
Medtr5g005470.1 M. truncatula Mt4.0v1 123424632 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5275 Viridiplantae