Gene : Bostr.11568s0048 B. stricta v1.2
Defline:  (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED Genomic Order:  48
Name:  ? Bostr.11568s0048 Secondary Identifier:  ? PAC:30673346
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.11568s0048 0.5kb upstream 0.5kb upstream 3790 true Scaffold11568: 308051-311840 Boechera stricta
Bostr.11568s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold11568: 311341-311840 Boechera stricta
Bostr.11568s0048 0.5kb downstream 0.5kb downstream 3790 true Scaffold11568: 307551-311340 Boechera stricta
Bostr.11568s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold11568: 307551-308050 Boechera stricta
Bostr.11568s0048 1.0kb upstream 1.0kb upstream 4290 true Scaffold11568: 308051-312340 Boechera stricta
Bostr.11568s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold11568: 311341-312340 Boechera stricta
Bostr.11568s0048 1.0kb downstream 1.0kb downstream 4290 true Scaffold11568: 307051-311340 Boechera stricta
Bostr.11568s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold11568: 307051-308050 Boechera stricta
Bostr.11568s0048 2.0kb upstream 2.0kb upstream 5290 true Scaffold11568: 308051-313340 Boechera stricta
Bostr.11568s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold11568: 311341-313340 Boechera stricta
Bostr.11568s0048 2.0kb downstream 2.0kb downstream 5290 true Scaffold11568: 306051-311340 Boechera stricta
Bostr.11568s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold11568: 306051-308050 Boechera stricta
Bostr.11568s0048 5.0kb upstream 5.0kb upstream 8290 true Scaffold11568: 308051-316340 Boechera stricta
Bostr.11568s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold11568: 311341-316340 Boechera stricta
Bostr.11568s0048 5.0kb downstream 5.0kb downstream 8290 true Scaffold11568: 303051-311340 Boechera stricta
Bostr.11568s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold11568: 303051-308050 Boechera stricta
Bostr.11568s0048 10.0kb upstream 10.0kb upstream 13290 true Scaffold11568: 308051-321340 Boechera stricta
Bostr.11568s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold11568: 311341-321340 Boechera stricta
Bostr.11568s0048 10.0kb downstream 10.0kb downstream 13290 true Scaffold11568: 298051-311340 Boechera stricta
Bostr.11568s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold11568: 298051-308050 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122341842 5261 Brassicaceae Singleton cluster - no MSA
123782207 5264 Brassicales-Malvales Singleton cluster - no MSA
124280479 5266 SBM Singleton cluster - no MSA
124252286 5268 Malvidae View MSA
123952725 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain