Protein Family : Eukaryotic rpb5 RNA polymerase subunit family protein 122793391

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  61

61 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29912.t000208 (1 of 3) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) R. communis v0.1 2385   29912: 1348732-1351116
Cucsa.388310 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. sativus v1.0 3457   scaffold03967: 754992-758448
orange1.1g030833m.g (1 of 3) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. sinensis v1.1 3311   scaffold00027: 148543-151853
AT3G22320 (1 of 5) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) A. thaliana TAIR10 NRPB5 1484   Chr3: 7890864-7892347
AT3G16680 (1 of 6) PF01191 - RNA polymerase Rpb5, C-terminal domain (RNA_pol_Rpb5_C) A. thaliana TAIR10 910   Chr3: 5683336-5684245
Thhalv10017724m.g (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED E. salsugineum v1.0 1425   scaffold_10: 11169891-11171315
Thhalv10021534m.g (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 E. salsugineum v1.0 1506   scaffold_13: 1145859-1147364
Ciclev10009504m.g (1 of 3) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. clementina v1.0 5157   scaffold_1: 6903804-6908960
Lus10001335.g (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 L. usitatissimum v1.0 1382   scaffold2292: 64009-65390
Lus10013639.g (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 L. usitatissimum v1.0 1373   scaffold317: 216014-217386
Gorai.001G007200 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. raimondii v2.1 3051   Chr01: 639924-642974
Gorai.004G280900 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. raimondii v2.1 3546   Chr04: 61270379-61273924
Thecc1EG037836 (1 of 4) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) T. cacao v1.1 2490   scaffold_9: 5563993-5566482
Migut.J01678 (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED M. guttatus v2.0 1198   scaffold_10: 18147301-18148498
Migut.C00444 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 M. guttatus v2.0 2575   scaffold_3: 11148529-11151103
Araha.16357s0001 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 A. halleri v1.1 1077   Scaffold16357: 3-1079
Cagra.1189s0008 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 C. grandiflora v1.1 1354   Scaffold1189: 21837-23190
Glyma.07G084000 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. max Wm82.a2.v1 2130   Chr07: 7748101-7750230
Glyma.09G192900 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 G. max Wm82.a2.v1 1791   Chr09: 41744439-41746229
Glyma.04G141500 (1 of 2) PTHR10535:SF5 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5C G. max Wm82.a2.v1 2890   Chr04: 23838512-23841401
Brara.C03870 (1 of 7) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 B. rapa FPsc v1.3 1484   A03: 20067643-20069126
Bostr.0556s0441 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 B. stricta v1.2 392   Scaffold556: 2614571-2614962
Bostr.11568s0048 (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED B. stricta v1.2 3290   Scaffold11568: 308051-311340
Bostr.19424s0424 (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 B. stricta v1.2 1556   Scaffold19424: 3830186-3831741
Medtr5g005470 (1 of 9) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 M. truncatula Mt4.0v1 3450   chr5: 465125-468574
SapurV1A.0328s0030 (1 of 3) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) S. purpurea v1.0 11599   chr06: 15306236-15317834
Eucgr.C01278 (1 of 3) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 E. grandis v2.0 2881   Chr03: 16675412-16678292
Prupe.2G121400 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 P. persica v2.1 5050   Pp02: 17859793-17864842
Prupe.2G121300 (1 of 4) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 P. persica v2.1 2691   Pp02: 17856920-17859610
Manes.08G057400 (1 of 2) PTHR10535:SF2 - DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A-RELATED M. esculenta v6.1 4654   Chromosome08: 6094167-6098820

61 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29912.m005482 R. communis v0.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
Cucsa.388310.1 C. sativus v1.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
Thhalv10017724m E. salsugineum v1.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Ciclev10009504m C. clementina v1.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
Gorai.004G280900.1 G. raimondii v2.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Migut.J01678.1.p M. guttatus v2.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Migut.C00444.1.p M. guttatus v2.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Glyma.09G192900.1.p G. max Wm82.a2.v1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5272 Eudicot
SapurV1A.0328s0030.1.p S. purpurea v1.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
Prupe.2G121300.1.p P. persica v2.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Manes.08G057400.1.p M. esculenta v6.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Manes.16G112700.1.p M. esculenta v6.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Kalax.2874s0001.1.p K. laxiflora v1.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Aqcoe2G108700.1.p A. coerulea v3.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Aqcoe7G260800.1.p A. coerulea v3.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Kaladp0058s0302.1.p K. fedtschenkoi v1.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA8614 T. pratense v2 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
DCAR_012060 D. carota v2.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
AUR62013142-RA C. quinoa v1.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
Potri.006G161600.1.p P. trichocarpa v3.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
PGSC0003DMP400038973 S. tuberosum v4.03 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5272 Eudicot
PGSC0003DMP400052436 S. tuberosum v4.03 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 3 5272 Eudicot
Oeu017863.1 O. europaea v1.0 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
VIT_211s0016g03530.2 V. vinifera v2.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
MD15G1208600 M. domestica v1.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
MD02G1093900 M. domestica v1.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
HanXRQChr04g0103651 H. annuus r1.2 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
HanXRQChr05g0138911 H. annuus r1.2 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot
orange1.1g030833m C. sinensis v1.1 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 1 5272 Eudicot
AT3G16680.1 A. thaliana TAIR10 122793391 Eukaryotic rpb5 RNA polymerase subunit family protein 2 5272 Eudicot