Gene : Bostr.19424s0424 B. stricta v1.2

Defline:  (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 Genomic Order:  424
Name:  ? Bostr.19424s0424 Secondary Identifier:  ? PAC:30661697

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.19424s0424 0.5kb upstream 0.5kb upstream 2056 true Scaffold19424: 3829686-3831741 Boechera stricta
Bostr.19424s0424 0.5kb upstream 0.5kb upstream 500 false Scaffold19424: 3829686-3830185 Boechera stricta
Bostr.19424s0424 0.5kb downstream 0.5kb downstream 2056 true Scaffold19424: 3830186-3832241 Boechera stricta
Bostr.19424s0424 0.5kb downstream 0.5kb downstream 500 false Scaffold19424: 3831742-3832241 Boechera stricta
Bostr.19424s0424 1.0kb upstream 1.0kb upstream 2556 true Scaffold19424: 3829186-3831741 Boechera stricta
Bostr.19424s0424 1.0kb upstream 1.0kb upstream 1000 false Scaffold19424: 3829186-3830185 Boechera stricta
Bostr.19424s0424 1.0kb downstream 1.0kb downstream 2556 true Scaffold19424: 3830186-3832741 Boechera stricta
Bostr.19424s0424 1.0kb downstream 1.0kb downstream 1000 false Scaffold19424: 3831742-3832741 Boechera stricta
Bostr.19424s0424 2.0kb upstream 2.0kb upstream 3556 true Scaffold19424: 3828186-3831741 Boechera stricta
Bostr.19424s0424 2.0kb upstream 2.0kb upstream 2000 false Scaffold19424: 3828186-3830185 Boechera stricta
Bostr.19424s0424 2.0kb downstream 2.0kb downstream 3556 true Scaffold19424: 3830186-3833741 Boechera stricta
Bostr.19424s0424 2.0kb downstream 2.0kb downstream 2000 false Scaffold19424: 3831742-3833741 Boechera stricta
Bostr.19424s0424 5.0kb upstream 5.0kb upstream 6556 true Scaffold19424: 3825186-3831741 Boechera stricta
Bostr.19424s0424 5.0kb upstream 5.0kb upstream 5000 false Scaffold19424: 3825186-3830185 Boechera stricta
Bostr.19424s0424 5.0kb downstream 5.0kb downstream 6556 true Scaffold19424: 3830186-3836741 Boechera stricta
Bostr.19424s0424 5.0kb downstream 5.0kb downstream 5000 false Scaffold19424: 3831742-3836741 Boechera stricta
Bostr.19424s0424 10.0kb upstream 10.0kb upstream 11556 true Scaffold19424: 3820186-3831741 Boechera stricta
Bostr.19424s0424 10.0kb upstream 10.0kb upstream 10000 false Scaffold19424: 3820186-3830185 Boechera stricta
Bostr.19424s0424 10.0kb downstream 10.0kb downstream 11556 true Scaffold19424: 3830186-3841741 Boechera stricta
Bostr.19424s0424 10.0kb downstream 10.0kb downstream 10000 false Scaffold19424: 3831742-3841741 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371657 5261 Brassicaceae View MSA
123833718 5264 Brassicales-Malvales View MSA
124340566 5266 SBM View MSA
124242111 5268 Malvidae View MSA
124061501 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain