Gene : Eucgr.C01278 E. grandis v2.0
Defline:  (1 of 3) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 Genomic Order:  855
Name:  ? Eucgr.C01278 Secondary Identifier:  ? PAC:32036115
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.C01278 0.5kb upstream 0.5kb upstream 3381 true Chr03: 16675412-16678792 Eucalyptus grandis
Eucgr.C01278 0.5kb upstream 0.5kb upstream 500 false Chr03: 16678293-16678792 Eucalyptus grandis
Eucgr.C01278 0.5kb downstream 0.5kb downstream 3381 true Chr03: 16674912-16678292 Eucalyptus grandis
Eucgr.C01278 0.5kb downstream 0.5kb downstream 500 false Chr03: 16674912-16675411 Eucalyptus grandis
Eucgr.C01278 1.0kb upstream 1.0kb upstream 3881 true Chr03: 16675412-16679292 Eucalyptus grandis
Eucgr.C01278 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16678293-16679292 Eucalyptus grandis
Eucgr.C01278 1.0kb downstream 1.0kb downstream 3881 true Chr03: 16674412-16678292 Eucalyptus grandis
Eucgr.C01278 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16674412-16675411 Eucalyptus grandis
Eucgr.C01278 2.0kb upstream 2.0kb upstream 4881 true Chr03: 16675412-16680292 Eucalyptus grandis
Eucgr.C01278 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16678293-16680292 Eucalyptus grandis
Eucgr.C01278 2.0kb downstream 2.0kb downstream 4881 true Chr03: 16673412-16678292 Eucalyptus grandis
Eucgr.C01278 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16673412-16675411 Eucalyptus grandis
Eucgr.C01278 5.0kb upstream 5.0kb upstream 7881 true Chr03: 16675412-16683292 Eucalyptus grandis
Eucgr.C01278 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16678293-16683292 Eucalyptus grandis
Eucgr.C01278 5.0kb downstream 5.0kb downstream 7881 true Chr03: 16670412-16678292 Eucalyptus grandis
Eucgr.C01278 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16670412-16675411 Eucalyptus grandis
Eucgr.C01278 10.0kb upstream 10.0kb upstream 12881 true Chr03: 16675412-16688292 Eucalyptus grandis
Eucgr.C01278 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16678293-16688292 Eucalyptus grandis
Eucgr.C01278 10.0kb downstream 10.0kb downstream 12881 true Chr03: 16665412-16678292 Eucalyptus grandis
Eucgr.C01278 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16665412-16675411 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061501 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.4841 0.0 136.377 High  
cufflinks 59.8732 0.0 132.676 High  
cufflinks 61.7937 0.0 137.007 High  
cufflinks 53.5643 0.0 118.511 High  
cufflinks 45.5335 0.0 100.695 High Low
cufflinks 47.1013 0.0 104.171 High Low

0 Strain