Gene : Glyma.09G192900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 Genomic Order:  1929
Name:  ? Glyma.09G192900 Secondary Identifier:  ? PAC:30484083
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.09G192900 0.5kb upstream 0.5kb upstream 2291 true Chr09: 41743939-41746229 Glycine max
Glyma.09G192900 0.5kb upstream 0.5kb upstream 500 false Chr09: 41743939-41744438 Glycine max
Glyma.09G192900 0.5kb downstream 0.5kb downstream 2291 true Chr09: 41744439-41746729 Glycine max
Glyma.09G192900 0.5kb downstream 0.5kb downstream 500 false Chr09: 41746230-41746729 Glycine max
Glyma.09G192900 1.0kb upstream 1.0kb upstream 2791 true Chr09: 41743439-41746229 Glycine max
Glyma.09G192900 1.0kb upstream 1.0kb upstream 1000 false Chr09: 41743439-41744438 Glycine max
Glyma.09G192900 1.0kb downstream 1.0kb downstream 2791 true Chr09: 41744439-41747229 Glycine max
Glyma.09G192900 1.0kb downstream 1.0kb downstream 1000 false Chr09: 41746230-41747229 Glycine max
Glyma.09G192900 2.0kb upstream 2.0kb upstream 3791 true Chr09: 41742439-41746229 Glycine max
Glyma.09G192900 2.0kb upstream 2.0kb upstream 2000 false Chr09: 41742439-41744438 Glycine max
Glyma.09G192900 2.0kb downstream 2.0kb downstream 3791 true Chr09: 41744439-41748229 Glycine max
Glyma.09G192900 2.0kb downstream 2.0kb downstream 2000 false Chr09: 41746230-41748229 Glycine max
Glyma.09G192900 5.0kb upstream 5.0kb upstream 6791 true Chr09: 41739439-41746229 Glycine max
Glyma.09G192900 5.0kb upstream 5.0kb upstream 5000 false Chr09: 41739439-41744438 Glycine max
Glyma.09G192900 5.0kb downstream 5.0kb downstream 6791 true Chr09: 41744439-41751229 Glycine max
Glyma.09G192900 5.0kb downstream 5.0kb downstream 5000 false Chr09: 41746230-41751229 Glycine max
Glyma.09G192900 10.0kb upstream 10.0kb upstream 11791 true Chr09: 41734439-41746229 Glycine max
Glyma.09G192900 10.0kb upstream 10.0kb upstream 10000 false Chr09: 41734439-41744438 Glycine max
Glyma.09G192900 10.0kb downstream 10.0kb downstream 11791 true Chr09: 41744439-41756229 Glycine max
Glyma.09G192900 10.0kb downstream 10.0kb downstream 10000 false Chr09: 41746230-41756229 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314097 5265 Fabidae View MSA
124061501 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.6028 0.0 108.672 High High
cufflinks 30.3393 0.0 80.9509 High  
cufflinks 33.2129 0.0 88.6199 High  
cufflinks 32.3666 0.0 86.3547 High  
cufflinks 29.5908 0.0 78.9486 High  
cufflinks 33.0623 0.0 88.2202 High  
cufflinks 24.3572 0.0 65.2023 High Low
cufflinks 39.9929 0.0 107.051 High High
cufflinks 31.0034 0.0 82.7132 High  
cufflinks 14.301     High  
cufflinks 20.697     High High
cufflinks 13.764     High  
cufflinks 13.364     High  
cufflinks 13.592     High  
cufflinks 15.452     High  
cufflinks 10.03     High Low
cufflinks 10.615     High  
cufflinks 9.737     High Low
cufflinks 15.859     High  
cufflinks 10.786     High  
cufflinks 19.271     High High
cufflinks 11.223     High  
cufflinks 13.311     High  
cufflinks 21.42     High High
cufflinks 10.373     High Low
cufflinks 13.12     High  

0 Strain