Gene : Cagra.1189s0008 C. grandiflora v1.1
Defline:  (1 of 6) PTHR10535 - DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 Genomic Order:  8
Name:  ? Cagra.1189s0008 Secondary Identifier:  ? PAC:28908960
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1189s0008 0.5kb upstream 0.5kb upstream 1854 true Scaffold1189: 21837-23690 Capsella grandiflora
Cagra.1189s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold1189: 23191-23690 Capsella grandiflora
Cagra.1189s0008 0.5kb downstream 0.5kb downstream 1854 true Scaffold1189: 21337-23190 Capsella grandiflora
Cagra.1189s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold1189: 21337-21836 Capsella grandiflora
Cagra.1189s0008 1.0kb upstream 1.0kb upstream 2354 true Scaffold1189: 21837-24190 Capsella grandiflora
Cagra.1189s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold1189: 23191-24190 Capsella grandiflora
Cagra.1189s0008 1.0kb downstream 1.0kb downstream 2354 true Scaffold1189: 20837-23190 Capsella grandiflora
Cagra.1189s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold1189: 20837-21836 Capsella grandiflora
Cagra.1189s0008 2.0kb upstream 2.0kb upstream 3354 true Scaffold1189: 21837-25190 Capsella grandiflora
Cagra.1189s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold1189: 23191-25190 Capsella grandiflora
Cagra.1189s0008 2.0kb downstream 2.0kb downstream 3354 true Scaffold1189: 19837-23190 Capsella grandiflora
Cagra.1189s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold1189: 19837-21836 Capsella grandiflora
Cagra.1189s0008 5.0kb upstream 5.0kb upstream 6354 true Scaffold1189: 21837-28190 Capsella grandiflora
Cagra.1189s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold1189: 23191-28190 Capsella grandiflora
Cagra.1189s0008 5.0kb downstream 5.0kb downstream 6354 true Scaffold1189: 16837-23190 Capsella grandiflora
Cagra.1189s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold1189: 16837-21836 Capsella grandiflora
Cagra.1189s0008 10.0kb upstream 10.0kb upstream 11354 true Scaffold1189: 21837-33190 Capsella grandiflora
Cagra.1189s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold1189: 23191-33190 Capsella grandiflora
Cagra.1189s0008 10.0kb downstream 10.0kb downstream 11354 true Scaffold1189: 11837-23190 Capsella grandiflora
Cagra.1189s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold1189: 11837-21836 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371657 5261 Brassicaceae View MSA
123833718 5264 Brassicales-Malvales View MSA
124340566 5266 SBM View MSA
124242111 5268 Malvidae View MSA
124061501 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain