Gene : RPB5 C. reinhardtii v5.6
Primary Identifier:  ? Cre09.g403219 Defline:  (1 of 1) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E)
Genomic Order:  913 Name:  ? Cre09.g403219
Secondary Identifier:  ? PAC:30780365
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre09.g403219 0.5kb upstream 0.5kb upstream 3940 true chromosome_9: 6071086-6075025 Chlamydomonas reinhardtii
Cre09.g403219 0.5kb upstream 0.5kb upstream 500 false chromosome_9: 6071086-6071585 Chlamydomonas reinhardtii
Cre09.g403219 0.5kb downstream 0.5kb downstream 3940 true chromosome_9: 6071586-6075525 Chlamydomonas reinhardtii
Cre09.g403219 0.5kb downstream 0.5kb downstream 500 false chromosome_9: 6075026-6075525 Chlamydomonas reinhardtii
Cre09.g403219 1.0kb upstream 1.0kb upstream 4440 true chromosome_9: 6070586-6075025 Chlamydomonas reinhardtii
Cre09.g403219 1.0kb upstream 1.0kb upstream 1000 false chromosome_9: 6070586-6071585 Chlamydomonas reinhardtii
Cre09.g403219 1.0kb downstream 1.0kb downstream 4440 true chromosome_9: 6071586-6076025 Chlamydomonas reinhardtii
Cre09.g403219 1.0kb downstream 1.0kb downstream 1000 false chromosome_9: 6075026-6076025 Chlamydomonas reinhardtii
Cre09.g403219 2.0kb upstream 2.0kb upstream 5440 true chromosome_9: 6069586-6075025 Chlamydomonas reinhardtii
Cre09.g403219 2.0kb upstream 2.0kb upstream 2000 false chromosome_9: 6069586-6071585 Chlamydomonas reinhardtii
Cre09.g403219 2.0kb downstream 2.0kb downstream 5440 true chromosome_9: 6071586-6077025 Chlamydomonas reinhardtii
Cre09.g403219 2.0kb downstream 2.0kb downstream 2000 false chromosome_9: 6075026-6077025 Chlamydomonas reinhardtii
Cre09.g403219 5.0kb upstream 5.0kb upstream 8440 true chromosome_9: 6066586-6075025 Chlamydomonas reinhardtii
Cre09.g403219 5.0kb upstream 5.0kb upstream 5000 false chromosome_9: 6066586-6071585 Chlamydomonas reinhardtii
Cre09.g403219 5.0kb downstream 5.0kb downstream 8440 true chromosome_9: 6071586-6080025 Chlamydomonas reinhardtii
Cre09.g403219 5.0kb downstream 5.0kb downstream 5000 false chromosome_9: 6075026-6080025 Chlamydomonas reinhardtii
Cre09.g403219 10.0kb upstream 10.0kb upstream 13440 true chromosome_9: 6061586-6075025 Chlamydomonas reinhardtii
Cre09.g403219 10.0kb upstream 10.0kb upstream 10000 false chromosome_9: 6061586-6071585 Chlamydomonas reinhardtii
Cre09.g403219 10.0kb downstream 10.0kb downstream 13440 true chromosome_9: 6071586-6085025 Chlamydomonas reinhardtii
Cre09.g403219 10.0kb downstream 10.0kb downstream 10000 false chromosome_9: 6075026-6085025 Chlamydomonas reinhardtii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108616 5260 Chlorophyte View MSA
123424632 5275 Viridiplantae View MSA

133 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.581        
cufflinks 11.631       High
cufflinks 7.37        
cufflinks 8.147        
cufflinks 9.588        
cufflinks 9.702        
cufflinks 9.778        
cufflinks 10.802       High
cufflinks 7.504        
cufflinks 3.13       Low
cufflinks 7.209        
cufflinks 9.552        
cufflinks 5.316        
cufflinks 9.997        
cufflinks 6.326        
cufflinks 10.931       High
cufflinks 3.182       Low
cufflinks 7.808        
cufflinks 3.032       Low
cufflinks 8.009        
cufflinks 8.002        
cufflinks 4.619       Low
cufflinks 8.049        
cufflinks 8.688        
cufflinks 4.266       Low
cufflinks 38.6019 0.888461 76.3152 High High
cufflinks 35.8242 9.00173 62.6466 High High
cufflinks 6.26982 0.0 12.9946    
cufflinks 12.7987 1.69927 23.8982   Low
cufflinks 20.0143 3.5631 36.4654   High

0 Strain