Protein Family : RNA polymerase II, Rpb4, core protein 124060840

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  37

37 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29680.t000075 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) R. communis v0.1 2055   29680: 481898-483952
Cucsa.325900 (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit C. sativus v1.0 3331   scaffold03132: 190122-193452
orange1.1g032568m.g (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit C. sinensis v1.1 2799   scaffold00063: 152047-154845
AT5G09920 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) A. thaliana TAIR10 NRPB4 1393   Chr5: 3096183-3097575
Thhalv10014976m.g (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit E. salsugineum v1.0 1608   scaffold_2: 3129812-3131419
Ciclev10026735m.g (1 of 3) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II C. clementina v1.0 2890   scaffold_7: 18948567-18951456
Lus10005796.g (1 of 5) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II L. usitatissimum v1.0 1092   scaffold24: 121833-122924
Gorai.006G238100 (1 of 3) KOG2351 - RNA polymerase II, fourth largest subunit G. raimondii v2.1 3021   Chr06: 48552504-48555524
Gorai.011G113800 (1 of 3) KOG2351 - RNA polymerase II, fourth largest subunit G. raimondii v2.1 3190   Chr11: 14559991-14563180
Thecc1EG001258 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) T. cacao v1.1 2615   scaffold_1: 6098677-6101291
Araha.6262s0005 (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit A. halleri v1.1 1415   Scaffold6262: 11106-12520
Cagra.1085s0066 (1 of 1) KOG2351 - RNA polymerase II, fourth largest subunit C. grandiflora v1.1 1449   Scaffold1085: 249924-251372
Glyma.05G189100 (1 of 8) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II G. max Wm82.a2.v1 3247   Chr05: 37493208-37496454
Glyma.16G084800 (1 of 8) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II G. max Wm82.a2.v1 6567   Chr16: 9951872-9958438
Glyma.03G088500 (1 of 8) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II G. max Wm82.a2.v1 3890   Chr03: 26302104-26305993
Brara.B00335 (1 of 6) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II B. rapa FPsc v1.3 1502   A02: 1566759-1568260
Brara.C00399 (1 of 6) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II B. rapa FPsc v1.3 1438   A03: 1879440-1880877
Medtr8g011890 (1 of 3) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II M. truncatula Mt4.0v1 3843   chr8: 3253475-3257317
SapurV1A.3170s0010 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) S. purpurea v1.0 2429   Scaffold3170: 6214-8642
Eucgr.I00318 (1 of 3) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II E. grandis v2.0 4696   Chr09: 6094725-6099420
Prupe.6G171500 (1 of 5) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II P. persica v2.1 3609   Pp06: 17651590-17655198
Prupe.4G017900 (1 of 2) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 P. persica v2.1 1632   Pp04: 838724-840355
Manes.09G146500 (1 of 4) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II M. esculenta v6.1 3124   Chromosome09: 26406985-26410108
Manes.08G141900 (1 of 4) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II M. esculenta v6.1 4464   Chromosome08: 30765605-30770068
AL6G20340 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) A. lyrata v2.1 1447   scaffold_6: 3918669-3920115
Tp57577_TGAC_v2_gene29359 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) T. pratense v2 9514   Tp57577_TGAC_v2_scaf_1158: 16226-25739
Phvul.010G030200 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) P. vulgaris v2.1 3784   Chr10: 4375919-4379702
Potri.005G084900 (1 of 3) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) P. trichocarpa v3.1 2764   Chr05: 6307675-6310438
Potri.007G080400 (1 of 3) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) P. trichocarpa v3.1 2713   Chr07: 10427143-10429855
Podel.07G090300 (1 of 3) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) P. deltoides WV94 v2.1 2645   Chr07: 10942305-10944949

37 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thecc1EG001258t1 T. cacao v1.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Glyma.03G088500.1.p G. max Wm82.a2.v1 124060840 RNA polymerase II, Rpb4, core protein 3 5270 Rosid
Glyma.05G189100.1.p G. max Wm82.a2.v1 124060840 RNA polymerase II, Rpb4, core protein 3 5270 Rosid
Glyma.16G084800.1.p G. max Wm82.a2.v1 124060840 RNA polymerase II, Rpb4, core protein 3 5270 Rosid
Brara.B00335.1.p B. rapa FPsc v1.3 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Eucgr.I00318.1.p E. grandis v2.0 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Prupe.4G017900.1.p P. persica v2.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Potri.007G080400.1.p P. trichocarpa v3.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Podel.05G092900.1.p P. deltoides WV94 v2.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
MD15G1331500 M. domestica v1.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
29680.m001732 R. communis v0.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Cucsa.325900.1 C. sativus v1.0 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
orange1.1g032568m C. sinensis v1.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
AT5G09920.1 A. thaliana TAIR10 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Thhalv10014976m E. salsugineum v1.0 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Ciclev10026735m C. clementina v1.0 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Lus10005796 L. usitatissimum v1.0 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Gorai.011G113800.1 G. raimondii v2.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Gorai.006G238100.1 G. raimondii v2.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Araha.6262s0005.1.p A. halleri v1.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Cagra.1085s0066.1.p C. grandiflora v1.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Brara.C00399.1.p B. rapa FPsc v1.3 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Medtr8g011890.2 M. truncatula Mt4.0v1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
SapurV1A.3170s0010.1.p S. purpurea v1.0 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Prupe.6G171500.1.p P. persica v2.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Manes.09G146500.1.p M. esculenta v6.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
Manes.08G141900.1.p M. esculenta v6.1 124060840 RNA polymerase II, Rpb4, core protein 2 5270 Rosid
AL6G20340.t1 A. lyrata v2.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Tp57577_TGAC_v2_mRNA30368 T. pratense v2 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid
Phvul.010G030200.1.p P. vulgaris v2.1 124060840 RNA polymerase II, Rpb4, core protein 1 5270 Rosid