Gene : Thecc1EG001258 T. cacao v1.1
Defline:  (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) Genomic Order:  1096
Name:  ? Thecc1EG001258 Secondary Identifier:  ? PAC:27436033
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG001258 0.5kb upstream 0.5kb upstream 3115 true scaffold_1: 6098677-6101791 Theobroma cacao
Thecc1EG001258 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 6101292-6101791 Theobroma cacao
Thecc1EG001258 0.5kb downstream 0.5kb downstream 3115 true scaffold_1: 6098177-6101291 Theobroma cacao
Thecc1EG001258 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 6098177-6098676 Theobroma cacao
Thecc1EG001258 1.0kb upstream 1.0kb upstream 3615 true scaffold_1: 6098677-6102291 Theobroma cacao
Thecc1EG001258 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 6101292-6102291 Theobroma cacao
Thecc1EG001258 1.0kb downstream 1.0kb downstream 3615 true scaffold_1: 6097677-6101291 Theobroma cacao
Thecc1EG001258 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 6097677-6098676 Theobroma cacao
Thecc1EG001258 2.0kb upstream 2.0kb upstream 4615 true scaffold_1: 6098677-6103291 Theobroma cacao
Thecc1EG001258 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 6101292-6103291 Theobroma cacao
Thecc1EG001258 2.0kb downstream 2.0kb downstream 4615 true scaffold_1: 6096677-6101291 Theobroma cacao
Thecc1EG001258 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 6096677-6098676 Theobroma cacao
Thecc1EG001258 5.0kb upstream 5.0kb upstream 7615 true scaffold_1: 6098677-6106291 Theobroma cacao
Thecc1EG001258 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 6101292-6106291 Theobroma cacao
Thecc1EG001258 5.0kb downstream 5.0kb downstream 7615 true scaffold_1: 6093677-6101291 Theobroma cacao
Thecc1EG001258 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 6093677-6098676 Theobroma cacao
Thecc1EG001258 10.0kb upstream 10.0kb upstream 12615 true scaffold_1: 6098677-6111291 Theobroma cacao
Thecc1EG001258 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 6101292-6111291 Theobroma cacao
Thecc1EG001258 10.0kb downstream 10.0kb downstream 12615 true scaffold_1: 6088677-6101291 Theobroma cacao
Thecc1EG001258 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 6088677-6098676 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833320 5264 Brassicales-Malvales View MSA
124337190 5266 SBM View MSA
124242479 5268 Malvidae View MSA
124060840 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain