Protein Family : RNA polymerase II, Rpb4, core protein 123744062

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  91

91 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29836.t000024 (1 of 1) PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 R. communis v0.1 2820   29836: 328961-331780
29680.t000075 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) R. communis v0.1 2055   29680: 481898-483952
Cucsa.325900 (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit C. sativus v1.0 3331   scaffold03132: 190122-193452
Cucsa.044470 (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 C. sativus v1.0 5190   scaffold00542: 805958-811147
orange1.1g027312m.g (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 C. sinensis v1.1 3164   scaffold00007: 2743945-2747108
orange1.1g032568m.g (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit C. sinensis v1.1 2799   scaffold00063: 152047-154845
AT4G15950 (1 of 1) PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 A. thaliana TAIR10 NRPD4 1447   Chr4: 9040683-9042129
AT5G09920 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) A. thaliana TAIR10 NRPB4 1393   Chr5: 3096183-3097575
Thhalv10014976m.g (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit E. salsugineum v1.0 1608   scaffold_2: 3129812-3131419
Thhalv10001026m.g (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 E. salsugineum v1.0 1692   scaffold_20: 2484318-2486009
Ciclev10026735m.g (1 of 3) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II C. clementina v1.0 2890   scaffold_7: 18948567-18951456
Ciclev10016499m.g (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 C. clementina v1.0 3193   scaffold_2: 36322877-36326069
Lus10005796.g (1 of 5) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II L. usitatissimum v1.0 1092   scaffold24: 121833-122924
Lus10038766.g (1 of 2) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 L. usitatissimum v1.0 1479   scaffold34: 191803-193281
Lus10039097.g (1 of 2) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 L. usitatissimum v1.0 1460   scaffold34: 1597373-1598832
Gorai.010G190700 (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 G. raimondii v2.1 3871   Chr10: 54460964-54464834
Gorai.006G238100 (1 of 3) KOG2351 - RNA polymerase II, fourth largest subunit G. raimondii v2.1 3021   Chr06: 48552504-48555524
Gorai.011G113800 (1 of 3) KOG2351 - RNA polymerase II, fourth largest subunit G. raimondii v2.1 3190   Chr11: 14559991-14563180
Thecc1EG001258 (1 of 2) K03012 - DNA-directed RNA polymerase II subunit RPB4 (RPB4, POLR2D) T. cacao v1.1 2615   scaffold_1: 6098677-6101291
Thecc1EG030466 (1 of 1) PTHR21297//PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASE II // DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 T. cacao v1.1 3249   scaffold_6: 27165850-27169098
Migut.M01463 (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 M. guttatus v2.0 3435   scaffold_13: 18542756-18546190
Migut.N02435 (1 of 3) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II M. guttatus v2.0 2186   scaffold_14: 21459188-21461373
Araha.11452s0002 (1 of 1) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 A. halleri v1.1 1483   Scaffold11452: 6224-7706
Araha.6262s0005 (1 of 2) KOG2351 - RNA polymerase II, fourth largest subunit A. halleri v1.1 1415   Scaffold6262: 11106-12520
Cagra.1085s0066 (1 of 1) KOG2351 - RNA polymerase II, fourth largest subunit C. grandiflora v1.1 1449   Scaffold1085: 249924-251372
Glyma.05G189100 (1 of 8) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II G. max Wm82.a2.v1 3247   Chr05: 37493208-37496454
Glyma.08G146800 (1 of 8) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II G. max Wm82.a2.v1 3017   Chr08: 11173407-11176423
Glyma.09G016100 (1 of 2) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 G. max Wm82.a2.v1 4115   Chr09: 1245386-1249500
Glyma.15G121800 (1 of 2) PTHR21297:SF2 - DNA-DIRECTED RNA POLYMERASES IV AND V SUBUNIT 4 G. max Wm82.a2.v1 4328   Chr15: 9643746-9648073
Glyma.16G084800 (1 of 8) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II G. max Wm82.a2.v1 6567   Chr16: 9951872-9958438

91 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thecc1EG001258t1 T. cacao v1.1 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
Araha.11452s0002.1.p A. halleri v1.1 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
Migut.M01463.1.p M. guttatus v2.0 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
Glyma.15G121800.1.p G. max Wm82.a2.v1 123744062 RNA polymerase II, Rpb4, core protein 6 5271 Pentapetalae
Glyma.03G088500.1.p G. max Wm82.a2.v1 123744062 RNA polymerase II, Rpb4, core protein 6 5271 Pentapetalae
Glyma.05G189100.1.p G. max Wm82.a2.v1 123744062 RNA polymerase II, Rpb4, core protein 6 5271 Pentapetalae
Glyma.08G146800.1.p G. max Wm82.a2.v1 123744062 RNA polymerase II, Rpb4, core protein 6 5271 Pentapetalae
Glyma.16G084800.1.p G. max Wm82.a2.v1 123744062 RNA polymerase II, Rpb4, core protein 6 5271 Pentapetalae
Brara.B00335.1.p B. rapa FPsc v1.3 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Eucgr.I00318.1.p E. grandis v2.0 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
Prupe.4G002300.1.p P. persica v2.1 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Prupe.4G017900.1.p P. persica v2.1 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Kalax.1604s0003.1.p K. laxiflora v1.1 123744062 RNA polymerase II, Rpb4, core protein 4 5271 Pentapetalae
Kalax.1255s0011.1.p K. laxiflora v1.1 123744062 RNA polymerase II, Rpb4, core protein 4 5271 Pentapetalae
Kalax.0601s0005.1.p K. laxiflora v1.1 123744062 RNA polymerase II, Rpb4, core protein 4 5271 Pentapetalae
Kaladp0026s0129.1.p K. fedtschenkoi v1.1 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
Kaladp0089s0119.1.p K. fedtschenkoi v1.1 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
DCAR_014263 D. carota v2.0 123744062 RNA polymerase II, Rpb4, core protein 1 5271 Pentapetalae
Solyc06g073870.2.1 S. lycopersicum ITAG2.4 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
Solyc04g015180.2.1 S. lycopersicum ITAG2.4 123744062 RNA polymerase II, Rpb4, core protein 2 5271 Pentapetalae
AUR62017630-RA C. quinoa v1.0 123744062 RNA polymerase II, Rpb4, core protein 5 5271 Pentapetalae
AUR62014931-RA C. quinoa v1.0 123744062 RNA polymerase II, Rpb4, core protein 5 5271 Pentapetalae
AUR62015177-RA C. quinoa v1.0 123744062 RNA polymerase II, Rpb4, core protein 5 5271 Pentapetalae
AUR62025415-RA C. quinoa v1.0 123744062 RNA polymerase II, Rpb4, core protein 5 5271 Pentapetalae
Potri.007G080400.1.p P. trichocarpa v3.1 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Podel.05G092900.1.p P. deltoides WV94 v2.1 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Oeu031381.1 O. europaea v1.0 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Oeu031443.2 O. europaea v1.0 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
Oeu025979.1 O. europaea v1.0 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae
MD15G1331500 M. domestica v1.1 123744062 RNA polymerase II, Rpb4, core protein 3 5271 Pentapetalae