Gene : Brara.C00399 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II Genomic Order:  399
Name:  ? Brara.C00399 Secondary Identifier:  ? PAC:30617020
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C00399 0.5kb upstream 0.5kb upstream 1938 true A03: 1878940-1880877 Brassica rapa FPsc
Brara.C00399 0.5kb upstream 0.5kb upstream 500 false A03: 1878940-1879439 Brassica rapa FPsc
Brara.C00399 0.5kb downstream 0.5kb downstream 1938 true A03: 1879440-1881377 Brassica rapa FPsc
Brara.C00399 0.5kb downstream 0.5kb downstream 500 false A03: 1880878-1881377 Brassica rapa FPsc
Brara.C00399 1.0kb upstream 1.0kb upstream 2438 true A03: 1878440-1880877 Brassica rapa FPsc
Brara.C00399 1.0kb upstream 1.0kb upstream 1000 false A03: 1878440-1879439 Brassica rapa FPsc
Brara.C00399 1.0kb downstream 1.0kb downstream 2438 true A03: 1879440-1881877 Brassica rapa FPsc
Brara.C00399 1.0kb downstream 1.0kb downstream 1000 false A03: 1880878-1881877 Brassica rapa FPsc
Brara.C00399 2.0kb upstream 2.0kb upstream 3438 true A03: 1877440-1880877 Brassica rapa FPsc
Brara.C00399 2.0kb upstream 2.0kb upstream 2000 false A03: 1877440-1879439 Brassica rapa FPsc
Brara.C00399 2.0kb downstream 2.0kb downstream 3438 true A03: 1879440-1882877 Brassica rapa FPsc
Brara.C00399 2.0kb downstream 2.0kb downstream 2000 false A03: 1880878-1882877 Brassica rapa FPsc
Brara.C00399 5.0kb upstream 5.0kb upstream 6438 true A03: 1874440-1880877 Brassica rapa FPsc
Brara.C00399 5.0kb upstream 5.0kb upstream 5000 false A03: 1874440-1879439 Brassica rapa FPsc
Brara.C00399 5.0kb downstream 5.0kb downstream 6438 true A03: 1879440-1885877 Brassica rapa FPsc
Brara.C00399 5.0kb downstream 5.0kb downstream 5000 false A03: 1880878-1885877 Brassica rapa FPsc
Brara.C00399 10.0kb upstream 10.0kb upstream 11438 true A03: 1869440-1880877 Brassica rapa FPsc
Brara.C00399 10.0kb upstream 10.0kb upstream 10000 false A03: 1869440-1879439 Brassica rapa FPsc
Brara.C00399 10.0kb downstream 10.0kb downstream 11438 true A03: 1879440-1890877 Brassica rapa FPsc
Brara.C00399 10.0kb downstream 10.0kb downstream 10000 false A03: 1880878-1890877 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369881 5261 Brassicaceae View MSA
123833320 5264 Brassicales-Malvales View MSA
124337190 5266 SBM View MSA
124242479 5268 Malvidae View MSA
124060840 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier