Gene : Eucgr.I00318 E. grandis v2.0
Defline:  (1 of 3) PTHR21297 - DNA-DIRECTED RNA POLYMERASE II Genomic Order:  258
Name:  ? Eucgr.I00318 Secondary Identifier:  ? PAC:32063170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.I00318 0.5kb upstream 0.5kb upstream 5196 true Chr09: 6094225-6099420 Eucalyptus grandis
Eucgr.I00318 0.5kb upstream 0.5kb upstream 500 false Chr09: 6094225-6094724 Eucalyptus grandis
Eucgr.I00318 0.5kb downstream 0.5kb downstream 5196 true Chr09: 6094725-6099920 Eucalyptus grandis
Eucgr.I00318 0.5kb downstream 0.5kb downstream 500 false Chr09: 6099421-6099920 Eucalyptus grandis
Eucgr.I00318 1.0kb upstream 1.0kb upstream 5696 true Chr09: 6093725-6099420 Eucalyptus grandis
Eucgr.I00318 1.0kb upstream 1.0kb upstream 1000 false Chr09: 6093725-6094724 Eucalyptus grandis
Eucgr.I00318 1.0kb downstream 1.0kb downstream 5696 true Chr09: 6094725-6100420 Eucalyptus grandis
Eucgr.I00318 1.0kb downstream 1.0kb downstream 1000 false Chr09: 6099421-6100420 Eucalyptus grandis
Eucgr.I00318 2.0kb upstream 2.0kb upstream 6696 true Chr09: 6092725-6099420 Eucalyptus grandis
Eucgr.I00318 2.0kb upstream 2.0kb upstream 2000 false Chr09: 6092725-6094724 Eucalyptus grandis
Eucgr.I00318 2.0kb downstream 2.0kb downstream 6696 true Chr09: 6094725-6101420 Eucalyptus grandis
Eucgr.I00318 2.0kb downstream 2.0kb downstream 2000 false Chr09: 6099421-6101420 Eucalyptus grandis
Eucgr.I00318 5.0kb upstream 5.0kb upstream 9696 true Chr09: 6089725-6099420 Eucalyptus grandis
Eucgr.I00318 5.0kb upstream 5.0kb upstream 5000 false Chr09: 6089725-6094724 Eucalyptus grandis
Eucgr.I00318 5.0kb downstream 5.0kb downstream 9696 true Chr09: 6094725-6104420 Eucalyptus grandis
Eucgr.I00318 5.0kb downstream 5.0kb downstream 5000 false Chr09: 6099421-6104420 Eucalyptus grandis
Eucgr.I00318 10.0kb upstream 10.0kb upstream 14696 true Chr09: 6084725-6099420 Eucalyptus grandis
Eucgr.I00318 10.0kb upstream 10.0kb upstream 10000 false Chr09: 6084725-6094724 Eucalyptus grandis
Eucgr.I00318 10.0kb downstream 10.0kb downstream 14696 true Chr09: 6094725-6109420 Eucalyptus grandis
Eucgr.I00318 10.0kb downstream 10.0kb downstream 10000 false Chr09: 6099421-6109420 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060840 5270 Rosid View MSA
123744062 5271 Pentapetalae View MSA
122792383 5272 Eudicot View MSA
122048092 5273 Angiosperm View MSA
123429036 5275 Viridiplantae View MSA
121349369 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.6192 0.0 75.6693    
cufflinks 35.3271 0.0 81.8094    
cufflinks 18.638 0.0 44.0589   Low
cufflinks 45.3513 0.0 145.105 High High
cufflinks 37.8455 0.0 87.0749 High  
cufflinks 18.1805 0.0 44.7287   Low

0 Strain