Protein Domain : IPR006638

Type:  Domain Name:  Elongator protein 3/MiaB/NifB
Description:  This domain is found in MoaA, NifB, PqqE, coproporphyrinogen III oxidase, biotin synthaseand MiaB families, and includes a representative in the eukaryotic elongator subunit, Elp-3. Somemembers of the family are methyltransferases []. Short Name:  Elp3/MiaB/NifB
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1 Child Features

DB identifier Type Name
IPR023404 Domain Radical SAM, alpha/beta horseshoe

2 Contains

DB identifier Type Name
IPR020612 Conserved_site Methylthiotransferase, conserved site
IPR000385 Conserved_site MoaA/nifB/pqqE, iron-sulphur binding, conserved site

1 Cross References

Identifier
SM00729

28 Found Ins

DB identifier Type Name
IPR004383 Family Ribosomal RNA large subunit methyltransferase RlmN/Cfr
IPR013785 Domain Aldolase-type TIM barrel
IPR019939 Family CofG family
IPR019940 Family CofH family
IPR005839 Family Methylthiotransferase
IPR006466 Family MiaB-like tRNA modifying enzyme, archaeal-type
IPR005910 Family Histone acetyltransferase ELP3
IPR013483 Family Molybdenum cofactor biosynthesis protein A
IPR002684 Family Biotin synthase/Biotin biosynthesis bifunctional protein BioAB
IPR005840 Family Ribosomal protein S12 methylthiotransferase RimO
IPR006463 Family tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB
IPR004558 Family Coproporphyrinogen III oxidase, oxygen-independent, HemN
IPR011843 Family Coenzyme PQQ biosynthesis protein E, bacteria
IPR005911 Family Conserved hypothetical protein CHP01212
IPR006467 Family MiaB-like tRNA modifying enzyme
IPR011772 Family Magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase
IPR014494 Family Predicted Fe-S oxidoreductase, NifB/MoaA-like family, euryarchaeota type
IPR016431 Family Pyruvate-formate lyase-activating enzyme, predicted
IPR016779 Family Radical SAM enzyme, MSMEG0568
IPR017200 Family Coenzyme PQQ synthesis protein E
IPR017672 Family Putative methanogenesis marker protein 10
IPR017833 Family Hopanoid biosynthesis associated radical SAM protein HpnH
IPR017834 Family Hopanoid biosynthesis associated radical SAM protein HpnJ
IPR022447 Family Lysine-2,3-aminomutase-related
IPR022459 Family Lysine-2,3-aminomutase
IPR022431 Family Cyclic dehypoxanthine futalosine synthase
IPR005909 Family Conserved hypothetical protein CHP01210
IPR013485 Family Molybdenum cofactor biosynthesis protein A, archaea

2 GO Annotations

GO Term Gene Name
GO:0003824 IPR006638
GO:0051536 IPR006638

2 Ontology Annotations

GO Term Gene Name
GO:0003824 IPR006638
GO:0051536 IPR006638

1 Parent Features

DB identifier Type Name
IPR007197 Domain Radical SAM

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
31574 D8RF06 PAC:15417785 Selaginella moellendorffii 421  
412711 D8RL87 PAC:15413852 Selaginella moellendorffii 469  
96899 D8RL74 PAC:15411019 Selaginella moellendorffii 557  
79056 D8QWC0 PAC:15421338 Selaginella moellendorffii 386  
417268 D8S2N8 PAC:15402310 Selaginella moellendorffii 185  
443492 D8S2N1 PAC:15413964 Selaginella moellendorffii 557  
180500 D8SKD9 PAC:15414005 Selaginella moellendorffii 469  
121095 D8SNA7 PAC:15414757 Selaginella moellendorffii 357  
424054 D8SNN2 PAC:15421409 Selaginella moellendorffii 613  
424158 D8SP04 PAC:15422197 Selaginella moellendorffii 353  
446559 D8SSE5 PAC:15423187 Selaginella moellendorffii 686  
409429 D8RBF3 PAC:15402378 Selaginella moellendorffii 796  
64240 D8QRF4 PAC:15423342 Selaginella moellendorffii 410  
185127 D8T3Q2 PAC:15403086 Selaginella moellendorffii 357  
evm.model.supercontig_1.412 PAC:16404358 Carica papaya 414  
evm.model.supercontig_189.4 PAC:16411816 Carica papaya 395  
evm.model.supercontig_4.68 PAC:16419365 Carica papaya 564  
evm.model.supercontig_6.187 PAC:16423361 Carica papaya 405  
evm.model.supercontig_66.10 PAC:16424542 Carica papaya 634  
evm.model.supercontig_71.17 PAC:16425423 Carica papaya 292  
29983.m003246 B9RW49 PAC:16815012 Ricinus communis 348  
30074.m001410 B9S747 PAC:16816971 Ricinus communis 630  
30147.m013802 B9RAM8 PAC:16819818 Ricinus communis 563  
30147.m013803 B9RAM9 PAC:16819819 Ricinus communis 478  
30226.m002030 B9REL9 PAC:16824273 Ricinus communis 390  
29634.m002060 B9S686 PAC:16804201 Ricinus communis 535  
27383.m000158 B9T4I0 PAC:16798179 Ricinus communis 420  
Cucsa.365100.2 PAC:16981367 Cucumis sativus 325  
Cucsa.147880.1 A0A0A0K1R3 PAC:16964074 Cucumis sativus 381  
Cucsa.147880.2 A0A0A0K1R3 PAC:16964075 Cucumis sativus 381  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11222759