Protein Domain : IPR005910

Type:  Family Name:  Histone acetyltransferase ELP3
Description:  Histone acetylation is carried out by a class of enzymes known as histone acetyltransferases (HATs), which catalyse the transfer of an acetyl group from acetyl-CoA to the lysine E-amino groups on the N-terminal tails of histones []. Early indication that HATs were involved in transcriptioncame from the observation that in actively transcribed regions of chromatin, histones tend to be hyperacetylated, whereas in transcriptionally silent regions histones are hypoacetylated. The histone acetyltransferases are divided into five families. These include the Gcn5-relatedacetyltransferases (GNATs); the MYST (for `MOZ, Ybf2/Sas3, Sas2 and Tip60)-related HATs; p300/CBP HATs; the general transcription factor HATs, which include the TFIID subunit TAF250;and the nuclear hormone-related HATs SRC1 and ACTR (SRC3). The GCN5-related N-acetyltransferase superfamily includes such enzymes as the histone acetyltransferases GCN5 and Hat1, the elongator complex subunit Elp3,the mediator-complex subunit Nut1, and Hpa2 [].Many GNATs share several functional domains, including an N-terminal region of variable length, an acetyltransferase domain that encompasses the conserved sequence motifs described above, aregion that interacts with the coactivator Ada2, and a C-terminal bromodomain that is believed to interact with acetyl-lysine residues. Members of the GNAT family are important for the regulation of cell growth and development. In mice, knockouts of Gcn5L are embryonic lethal. Yeast Gcn5 is needed for normal progressionthrough the G2-M boundary and mitotic gene expression. The importance of GNATs is probably related to their role in transcription and DNA repair.The yeast GCN5 (yGCN5) transcriptional coactivator functions as a histone acetyltransferase (HAT) to promote transcriptional activation. The crystal structure of the yeast histone acetyltransferase Hat1-acetyl coenzyme A (AcCoA) shows that Hat1 has an elongated, curved structure, and the AcCoA molecule is bound in a cleft on the concave surface of the protein, marking the active site of the enzyme. A channel of variable width and depth that runs across the protein is probably the binding site for the histone substrate []. The central protein core associated with AcCoA binding that appears to be structurally conserved among a superfamily of N-acetyltransferases, including yeast histone acetyltransferase 1 and Serratia marcescensaminoglycoside 3-N-acetyltransferase [].The Saccharomyces cerevisiae(Baker's yeast) member YPL086C has been characterised in vitro as an N-terminal acetyltransferase () for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases. In vivo, ELP3 gene deletion confers typical ELP phenotypes such as slow growth adaptation, slow gene activation, and temperature sensitivity. This suggests a role for the proteins as novel, tightly RNAPII-associated histone acetyltransferases in transcription of DNA packaged in chromatin []. Short Name:  Hist_AcTrfase_ELP3

0 Child Features

2 Contains

DB identifier Type Name
IPR000182 Domain GNAT domain
IPR006638 Domain Elongator protein 3/MiaB/NifB

2 Cross Referencess

Identifier
PIRSF005669
TIGR01211

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

369 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
412711 D8RL87 PAC:15413852 Selaginella moellendorffii 469  
96899 D8RL74 PAC:15411019 Selaginella moellendorffii 557  
443492 D8S2N1 PAC:15413964 Selaginella moellendorffii 557  
evm.model.supercontig_4.68 PAC:16419365 Carica papaya 564  
30147.m013802 B9RAM8 PAC:16819818 Ricinus communis 563  
Cucsa.196230.1 A0A0A0LP05 PAC:16968235 Cucumis sativus 564  
orange1.1g008466m A0A067G1I4 PAC:18132164 Citrus sinensis 564  
AT5G50320.1 Q93ZR1 PAC:19672847 Arabidopsis thaliana 565  
Thhalv10013124m V4LUN9 PAC:20204524 Eutrema salsugineum 565  
Ciclev10019518m V4SZJ3 PAC:20808082 Citrus clementina 564  
Lus10001102 PAC:23171897 Linum usitatissimum 570  
Lus10014792 PAC:23150214 Linum usitatissimum 564  
Potri.015G090500.1 B9IF53 PAC:27017322 Populus trichocarpa 563  
Potri.012G092800.3 PAC:27049358 Populus trichocarpa 525  
Potri.012G092800.1 A0A2K1YB99 PAC:27049357 Populus trichocarpa 575  
Potri.012G092800.2 PAC:27049359 Populus trichocarpa 490  
Gorai.003G153300.1 A0A0D2RN71 PAC:26800569 Gossypium raimondii 264  
Gorai.007G041800.3 A0A0D2S6T0 PAC:26778371 Gossypium raimondii 378  
Gorai.007G041800.2 A0A0D2QLA4 PAC:26778368 Gossypium raimondii 564  
Gorai.007G041800.1 A0A0D2T8S2 PAC:26778367 Gossypium raimondii 596  
Gorai.007G041800.5 A0A0D2SDZ3 PAC:26778370 Gossypium raimondii 484  
Gorai.007G041800.4 A0A0D2P2U5 PAC:26778369 Gossypium raimondii 516  
52155 I0Z9T6 PAC:27389084 Coccomyxa subellipsoidea C-169 553  
45784 C1N030 PAC:27344274 Micromonas pusilla CCMP1545 525  
64699 C1EIU0 PAC:27397045 Micromonas sp RCC299 541  
27329 A4S727 PAC:27419798 Ostreococcus lucimarinus 555  
Thecc1EG014566t2 A0A061FZ81 PAC:27449872 Theobroma cacao 472  
Thecc1EG014566t3 A0A061G5Q4 PAC:27449870 Theobroma cacao 564  
Thecc1EG014566t4 A0A061FXV9 PAC:27449871 Theobroma cacao 507  
Thecc1EG014566t1 A0A061FZQ5 PAC:27449869 Theobroma cacao 564  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9175471
            9727486
            10430873
            10445034
            12801725