Protein Domain : IPR006466

Type:  Family Name:  MiaB-like tRNA modifying enzyme, archaeal-type
Description:  This clade of sequences is closely related to MiaB, a modifier of isopentenylated adenosine-37 of certain eukaryotic and bacterial tRNAs (see ). Sequence alignments suggest that this family of sequences perform the same chemical transformation as MiaB, perhaps on a different (or differently modified) tRNA base substrate. This clade represents a subfamily that spans the archaea and eukaryotes. The only archaeal miaB-like genes are in this group of sequences [, , ]. Short Name:  MiaB-like_B
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0 Child Features

4 Contains

DB identifier Type Name
IPR013785 Domain Aldolase-type TIM barrel
IPR006638 Domain Elongator protein 3/MiaB/NifB
IPR013848 Domain Methylthiotransferase, N-terminal
IPR020612 Conserved_site Methylthiotransferase, conserved site

1 Cross References

Identifier
TIGR01578

0 Found In

0 GO Annotation

0 Ontology Annotations

1 Parent Features

DB identifier Type Name
IPR005839 Family Methylthiotransferase

338 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
31574 D8RF06 PAC:15417785 Selaginella moellendorffii 421  
evm.model.supercontig_66.10 PAC:16424542 Carica papaya 634  
30074.m001410 B9S747 PAC:16816971 Ricinus communis 630  
Cucsa.061610.1 PAC:16954908 Cucumis sativus 635  
orange1.1g006956m A0A067GWL8 PAC:18091348 Citrus sinensis 624  
orange1.1g006836m A0A067GZA4 PAC:18091347 Citrus sinensis 629  
orange1.1g007001m A0A067GWA9 PAC:18091349 Citrus sinensis 622  
orange1.1g010162m A0A067H8T6 PAC:18091350 Citrus sinensis 516  
orange1.1g013195m A0A067H8F9 PAC:18091352 Citrus sinensis 448  
orange1.1g012929m A0A067GWB4 PAC:18091351 Citrus sinensis 453  
AT1G72090.1 Q9C7H2 PAC:19658225 Arabidopsis thaliana 601  
Thhalv10018307m V4KAB8 PAC:20192110 Eutrema salsugineum 603  
Ciclev10000888m V4T416 PAC:20785912 Citrus clementina 516  
Ciclev10001135m V4SJM2 PAC:20785913 Citrus clementina 448  
Ciclev10000582m V4V758 PAC:20785911 Citrus clementina 629  
Ciclev10001774m V4TE28 PAC:20785914 Citrus clementina 335  
Lus10016926 PAC:23159604 Linum usitatissimum 610  
Potri.013G107800.2 PAC:26994969 Populus trichocarpa 612  
Potri.013G107800.1 A0A2K1Y419 PAC:26994968 Populus trichocarpa 625  
Gorai.009G288500.3 A0A0D2S9Z6 PAC:26767345 Gossypium raimondii 546  
Gorai.009G288500.2 A0A0D2UVJ6 PAC:26767344 Gossypium raimondii 586  
Gorai.009G288500.1 A0A0D2TTM7 PAC:26767343 Gossypium raimondii 617  
35241 I0Z825 PAC:27393723 Coccomyxa subellipsoidea C-169 494  
29134 C1N354 PAC:27348938 Micromonas pusilla CCMP1545 542  
67233 C1E351 PAC:27400569 Micromonas sp RCC299 435  
14633 A4RUI0 PAC:27413464 Ostreococcus lucimarinus 516  
Thecc1EG036466t1 A0A061FK81 PAC:27456470 Theobroma cacao 623  
Migut.C01307.1.p A0A022Q593 PAC:28945644 Mimulus guttatus 605  
Araha.0408s0008.1.p PAC:28847321 Arabidopsis halleri 588  
Cagra.4006s0020.1.p PAC:28913386 Capsella grandiflora 604  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11313137
            10572129
            11882645