Protein Family : core histone H2A/H2B/H3/H4, putative, expressed 121351220

Method ID:  5274 Method Name:  Embryophyte
Sequence Alignment:  View MSA Member Count:  259

259 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29844.t000178 (1 of 3) K08066 - nuclear transcription factor Y, gamma (NFYC) R. communis v0.1 2071   29844: 1010462-1012532
30128.t000211 (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // SUBFAMILY NOT NAMED R. communis v0.1 1782   30128: 836736-838517
30147.t000764 (1 of 1) PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED R. communis v0.1 1488   30147: 2287169-2288656
30169.t000082 (1 of 1) PTHR10252//PTHR10252:SF48 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED R. communis v0.1 3345   30169: 388420-391764
Cucsa.182170 (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED C. sativus v1.0 3238   scaffold01251: 250280-253517
Cucsa.157300 (1 of 1) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED C. sativus v1.0 4915   scaffold01141: 274600-279514
Cucsa.345940 (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED C. sativus v1.0 2454   scaffold03443: 242404-244857
orange1.1g024265m.g (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED C. sinensis v1.1 3997   scaffold00052: 302735-306731
orange1.1g019814m.g (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED C. sinensis v1.1 3024   scaffold00067: 73671-76694
orange1.1g026901m.g (1 of 1) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED C. sinensis v1.1 4359   scaffold00309: 155748-160106
AT5G63470 (1 of 1) PTHR10252//PTHR10252:SF38 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 A. thaliana TAIR10 NF-YC4 1417   Chr5: 25415701-25417117
AT3G48590 (1 of 4) PTHR10252//PTHR10252:SF39 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED A. thaliana TAIR10 NF-YC1 1326   Chr3: 18008657-18009982
AT1G08970 (1 of 2) K08066 - nuclear transcription factor Y, gamma (NFYC) A. thaliana TAIR10 NF-YC9 1814   Chr1: 2882524-2884337
AT1G56170 (1 of 3) PTHR10252//PTHR10252:SF48 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED A. thaliana TAIR10 NF-YC2 1120   Chr1: 21024764-21025883
AT1G54830 (1 of 2) K08066 - nuclear transcription factor Y, gamma (NFYC) A. thaliana TAIR10 NF-YC3 1589   Chr1: 20451083-20452671
Thhalv10010679m.g (1 of 3) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED E. salsugineum v1.0 1221   scaffold_16: 3496281-3497501
Thhalv10008649m.g (1 of 2) PTHR10252:SF48 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED E. salsugineum v1.0 1713   scaffold_5: 12700000-12701712
Thhalv10004831m.g (1 of 3) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED E. salsugineum v1.0 1428   scaffold_6: 1635865-1637292
Thhalv10011820m.g (1 of 1) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED E. salsugineum v1.0 1212   scaffold_7: 53840-55051
Thhalv10023684m.g (1 of 2) PTHR10252:SF48 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED E. salsugineum v1.0 2031   scaffold_8: 10442249-10444279
Ciclev10002193m.g (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED C. clementina v1.0 3137   scaffold_5: 32699553-32702689
Ciclev10032646m.g (1 of 1) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED C. clementina v1.0 3790   scaffold_4: 12320439-12324228
Ciclev10007003m.g (1 of 2) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED C. clementina v1.0 813   scaffold_9: 30983347-30984159
Lus10021934.g (1 of 4) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED L. usitatissimum v1.0 714   scaffold164: 650295-651008
Lus10041221.g (1 of 4) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED L. usitatissimum v1.0 708   scaffold280: 1488206-1488913
Lus10022444.g (1 of 2) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED L. usitatissimum v1.0 3262   scaffold38: 566120-569381
Lus10029939.g (1 of 4) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED L. usitatissimum v1.0 762   scaffold416: 743891-744652
Lus10004468.g (1 of 4) PTHR10252//PTHR10252:SF49 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED L. usitatissimum v1.0 762   scaffold768: 32314-33075
Lus10016750.g (1 of 2) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED L. usitatissimum v1.0 798   scaffold903: 345506-346303
Gorai.001G058500 (1 of 2) PTHR10252:SF39 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-1-RELATED G. raimondii v2.1 4112   Chr01: 5768565-5772676

259 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29844.m003332 R. communis v0.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 4 5274 Embryophyte
30169.m006305 R. communis v0.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 4 5274 Embryophyte
30147.m014493 R. communis v0.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 4 5274 Embryophyte
30128.m008750 R. communis v0.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 4 5274 Embryophyte
Cucsa.182170.1 C. sativus v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
Cucsa.345940.1 C. sativus v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
Cucsa.157300.1 C. sativus v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
orange1.1g019814m C. sinensis v1.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
orange1.1g026901m C. sinensis v1.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
orange1.1g024265m C. sinensis v1.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
AT1G54830.2 A. thaliana TAIR10 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
AT1G08970.4 A. thaliana TAIR10 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
AT1G56170.1 A. thaliana TAIR10 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
AT3G48590.1 A. thaliana TAIR10 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
AT5G63470.1 A. thaliana TAIR10 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
Thhalv10011820m E. salsugineum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
Thhalv10008649m E. salsugineum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
Thhalv10010679m E. salsugineum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
Thhalv10023684m E. salsugineum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
Thhalv10004831m E. salsugineum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 5 5274 Embryophyte
Ciclev10032646m C. clementina v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
Ciclev10002193m C. clementina v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
Ciclev10007003m C. clementina v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 3 5274 Embryophyte
Lus10016750 L. usitatissimum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 6 5274 Embryophyte
Lus10041221 L. usitatissimum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 6 5274 Embryophyte
Lus10022444 L. usitatissimum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 6 5274 Embryophyte
Lus10029939 L. usitatissimum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 6 5274 Embryophyte
Lus10004468 L. usitatissimum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 6 5274 Embryophyte
Lus10021934 L. usitatissimum v1.0 121351220 core histone H2A/H2B/H3/H4, putative, expressed 6 5274 Embryophyte
Gorai.007G295600.1 G. raimondii v2.1 121351220 core histone H2A/H2B/H3/H4, putative, expressed 7 5274 Embryophyte