Gene : NF-YC4 A. thaliana TAIR10
Primary Identifier:  ? AT5G63470 Defline:  (1 of 1) PTHR10252//PTHR10252:SF38 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4
Genomic Order:  5860 Name:  ? AT5G63470
Secondary Identifier:  ? PAC:19671028
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63470 0.5kb upstream 0.5kb upstream 1917 true Chr5: 25415701-25417617 Arabidopsis thaliana
AT5G63470 0.5kb upstream 0.5kb upstream 500 false Chr5: 25417118-25417617 Arabidopsis thaliana
AT5G63470 0.5kb downstream 0.5kb downstream 1917 true Chr5: 25415201-25417117 Arabidopsis thaliana
AT5G63470 0.5kb downstream 0.5kb downstream 500 false Chr5: 25415201-25415700 Arabidopsis thaliana
AT5G63470 1.0kb upstream 1.0kb upstream 2417 true Chr5: 25415701-25418117 Arabidopsis thaliana
AT5G63470 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25417118-25418117 Arabidopsis thaliana
AT5G63470 1.0kb downstream 1.0kb downstream 2417 true Chr5: 25414701-25417117 Arabidopsis thaliana
AT5G63470 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25414701-25415700 Arabidopsis thaliana
AT5G63470 2.0kb upstream 2.0kb upstream 3417 true Chr5: 25415701-25419117 Arabidopsis thaliana
AT5G63470 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25417118-25419117 Arabidopsis thaliana
AT5G63470 2.0kb downstream 2.0kb downstream 3417 true Chr5: 25413701-25417117 Arabidopsis thaliana
AT5G63470 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25413701-25415700 Arabidopsis thaliana
AT5G63470 5.0kb upstream 5.0kb upstream 6417 true Chr5: 25415701-25422117 Arabidopsis thaliana
AT5G63470 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25417118-25422117 Arabidopsis thaliana
AT5G63470 5.0kb downstream 5.0kb downstream 6417 true Chr5: 25410701-25417117 Arabidopsis thaliana
AT5G63470 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25410701-25415700 Arabidopsis thaliana
AT5G63470 10.0kb upstream 10.0kb upstream 11417 true Chr5: 25415701-25427117 Arabidopsis thaliana
AT5G63470 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25417118-25427117 Arabidopsis thaliana
AT5G63470 10.0kb downstream 10.0kb downstream 11417 true Chr5: 25405701-25417117 Arabidopsis thaliana
AT5G63470 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25405701-25415700 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381381 5261 Brassicaceae View MSA
123840836 5264 Brassicales-Malvales View MSA
124344092 5266 SBM View MSA
124241010 5268 Malvidae View MSA
124063983 5270 Rosid View MSA
123739955 5271 Pentapetalae View MSA
122787059 5272 Eudicot View MSA
122049205 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.015        
cufflinks 6.081        
cufflinks 16.948        
cufflinks 6.242        
cufflinks 19.302       High
cufflinks 5.643       Low

0 Strain