Gene : NF-YC2 A. thaliana TAIR10
Primary Identifier:  ? AT1G56170 Defline:  (1 of 3) PTHR10252//PTHR10252:SF48 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED // NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-3-RELATED
Genomic Order:  4680 Name:  ? AT1G56170
Secondary Identifier:  ? PAC:19657519
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G56170 0.5kb upstream 0.5kb upstream 1620 true Chr1: 21024264-21025883 Arabidopsis thaliana
AT1G56170 0.5kb upstream 0.5kb upstream 500 false Chr1: 21024264-21024763 Arabidopsis thaliana
AT1G56170 0.5kb downstream 0.5kb downstream 1620 true Chr1: 21024764-21026383 Arabidopsis thaliana
AT1G56170 0.5kb downstream 0.5kb downstream 500 false Chr1: 21025884-21026383 Arabidopsis thaliana
AT1G56170 1.0kb upstream 1.0kb upstream 2120 true Chr1: 21023764-21025883 Arabidopsis thaliana
AT1G56170 1.0kb upstream 1.0kb upstream 1000 false Chr1: 21023764-21024763 Arabidopsis thaliana
AT1G56170 1.0kb downstream 1.0kb downstream 2120 true Chr1: 21024764-21026883 Arabidopsis thaliana
AT1G56170 1.0kb downstream 1.0kb downstream 1000 false Chr1: 21025884-21026883 Arabidopsis thaliana
AT1G56170 2.0kb upstream 2.0kb upstream 3120 true Chr1: 21022764-21025883 Arabidopsis thaliana
AT1G56170 2.0kb upstream 2.0kb upstream 2000 false Chr1: 21022764-21024763 Arabidopsis thaliana
AT1G56170 2.0kb downstream 2.0kb downstream 3120 true Chr1: 21024764-21027883 Arabidopsis thaliana
AT1G56170 2.0kb downstream 2.0kb downstream 2000 false Chr1: 21025884-21027883 Arabidopsis thaliana
AT1G56170 5.0kb upstream 5.0kb upstream 6120 true Chr1: 21019764-21025883 Arabidopsis thaliana
AT1G56170 5.0kb upstream 5.0kb upstream 5000 false Chr1: 21019764-21024763 Arabidopsis thaliana
AT1G56170 5.0kb downstream 5.0kb downstream 6120 true Chr1: 21024764-21030883 Arabidopsis thaliana
AT1G56170 5.0kb downstream 5.0kb downstream 5000 false Chr1: 21025884-21030883 Arabidopsis thaliana
AT1G56170 10.0kb upstream 10.0kb upstream 11120 true Chr1: 21014764-21025883 Arabidopsis thaliana
AT1G56170 10.0kb upstream 10.0kb upstream 10000 false Chr1: 21014764-21024763 Arabidopsis thaliana
AT1G56170 10.0kb downstream 10.0kb downstream 11120 true Chr1: 21024764-21035883 Arabidopsis thaliana
AT1G56170 10.0kb downstream 10.0kb downstream 10000 false Chr1: 21025884-21035883 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364628 5261 Brassicaceae View MSA
123798795 5264 Brassicales-Malvales View MSA
124296387 5266 SBM View MSA
124248043 5268 Malvidae View MSA
124067484 5270 Rosid View MSA
123752429 5271 Pentapetalae View MSA
122774553 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.758        
cufflinks 11.209       High
cufflinks 2.884       Low
cufflinks 9.246        
cufflinks 3.095        
cufflinks 5.806        

0 Strain