Gene : NF-YC9 A. thaliana TAIR10
Primary Identifier:  ? AT1G08970 Defline:  (1 of 2) K08066 - nuclear transcription factor Y, gamma (NFYC)
Genomic Order:  844 Name:  ? AT1G08970
Secondary Identifier:  ? PAC:19656036
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G08970 0.5kb upstream 0.5kb upstream 2314 true Chr1: 2882024-2884337 Arabidopsis thaliana
AT1G08970 0.5kb upstream 0.5kb upstream 500 false Chr1: 2882024-2882523 Arabidopsis thaliana
AT1G08970 0.5kb downstream 0.5kb downstream 2314 true Chr1: 2882524-2884837 Arabidopsis thaliana
AT1G08970 0.5kb downstream 0.5kb downstream 500 false Chr1: 2884338-2884837 Arabidopsis thaliana
AT1G08970 1.0kb upstream 1.0kb upstream 2814 true Chr1: 2881524-2884337 Arabidopsis thaliana
AT1G08970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 2881524-2882523 Arabidopsis thaliana
AT1G08970 1.0kb downstream 1.0kb downstream 2814 true Chr1: 2882524-2885337 Arabidopsis thaliana
AT1G08970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 2884338-2885337 Arabidopsis thaliana
AT1G08970 2.0kb upstream 2.0kb upstream 3814 true Chr1: 2880524-2884337 Arabidopsis thaliana
AT1G08970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 2880524-2882523 Arabidopsis thaliana
AT1G08970 2.0kb downstream 2.0kb downstream 3814 true Chr1: 2882524-2886337 Arabidopsis thaliana
AT1G08970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 2884338-2886337 Arabidopsis thaliana
AT1G08970 5.0kb upstream 5.0kb upstream 6814 true Chr1: 2877524-2884337 Arabidopsis thaliana
AT1G08970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 2877524-2882523 Arabidopsis thaliana
AT1G08970 5.0kb downstream 5.0kb downstream 6814 true Chr1: 2882524-2889337 Arabidopsis thaliana
AT1G08970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 2884338-2889337 Arabidopsis thaliana
AT1G08970 10.0kb upstream 10.0kb upstream 11814 true Chr1: 2872524-2884337 Arabidopsis thaliana
AT1G08970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 2872524-2882523 Arabidopsis thaliana
AT1G08970 10.0kb downstream 10.0kb downstream 11814 true Chr1: 2882524-2894337 Arabidopsis thaliana
AT1G08970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 2884338-2894337 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366542 5261 Brassicaceae View MSA
123838464 5264 Brassicales-Malvales View MSA
124342477 5266 SBM View MSA
124251136 5268 Malvidae View MSA
124071144 5270 Rosid View MSA
123743416 5271 Pentapetalae View MSA
122794744 5272 Eudicot View MSA
122049278 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121351220 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.054        
cufflinks 6.343        
cufflinks 4.315       Low
cufflinks 7.662       High
cufflinks 4.548        
cufflinks 6.66        

0 Strain