Protein Family : lycopene cyclase 124240984

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  22

22 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29941.t000007 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) R. communis v0.1 2153   29941: 65556-67708
orange1.1g014377m.g (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC C. sinensis v1.1 2083   scaffold00218: 25474-27556
AT3G10230 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) A. thaliana TAIR10 LYC 1964   Chr3: 3164075-3166038
Thhalv10020573m.g (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC E. salsugineum v1.0 2133   scaffold_13: 6247645-6249777
Ciclev10004730m.g (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC C. clementina v1.0 1777   scaffold_9: 22728310-22730086
Lus10038986.g (1 of 2) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC L. usitatissimum v1.0 1524   scaffold34: 1137424-1138947
Lus10027278.g (1 of 2) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC L. usitatissimum v1.0 1524   scaffold472: 601029-602552
Gorai.013G002400 (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC G. raimondii v2.1 2396   Chr13: 190621-193016
Thecc1EG024409 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) T. cacao v1.1 2685   scaffold_5: 25226631-25229315
Araha.1295s0006 (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC A. halleri v1.1 1506   Scaffold1295: 17683-19188
Brara.E03030 (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC B. rapa FPsc v1.3 1977   A05: 25285522-25287498
Bostr.22252s0039 (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC B. stricta v1.2 1506   Scaffold22252: 198879-200384
SapurV1A.0797s0030 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) S. purpurea v1.0 2313   chr16: 6019665-6021977
Manes.09G008200 (1 of 1) PTHR13789:SF249 - LYCOPENE BETA CYCLASE, CHLOROPLASTIC M. esculenta v6.1 3239   Chromosome09: 1673410-1676648
AL3G21570 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) A. lyrata v2.1 1832   scaffold_3: 4076581-4078412
Potri.006G043100 (1 of 3) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) P. trichocarpa v3.1 2240   Chr06: 3051113-3053352
Potri.016G040200 (1 of 3) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) P. trichocarpa v3.1 5625   Chr16: 2461144-2466768
Potri.T138700 (1 of 3) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) P. trichocarpa v3.1 1960   scaffold_301: 43214-45173
Podel.06G043900 (1 of 5) 5.5.1.19 - Lycopene beta-cyclase P. deltoides WV94 v2.1 1976   Chr06: 3148846-3150821
Podel.06G043400 (1 of 5) 5.5.1.19 - Lycopene beta-cyclase P. deltoides WV94 v2.1 1763   Chr06: 3110252-3112014
Podel.16G043300 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) P. deltoides WV94 v2.1 2272   Chr16: 2720389-2722660
Carub.0003s0940 (1 of 1) K06443 - lycopene beta-cyclase (lcyB, crtL1, crtY) C. rubella v1.1 1491   scaffold_3: 3218358-3219848

22 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29941.m000224 R. communis v0.1 124240984 lycopene cyclase 1 5268 Malvidae
AT3G10230.1 A. thaliana TAIR10 124240984 lycopene cyclase 1 5268 Malvidae
Lus10038986 L. usitatissimum v1.0 124240984 lycopene cyclase 2 5268 Malvidae
SapurV1A.0797s0030.1.p S. purpurea v1.0 124240984 lycopene cyclase 1 5268 Malvidae
Potri.T138700.1.p P. trichocarpa v3.1 124240984 lycopene cyclase 3 5268 Malvidae
orange1.1g014377m C. sinensis v1.1 124240984 lycopene cyclase 1 5268 Malvidae
Thhalv10020573m E. salsugineum v1.0 124240984 lycopene cyclase 1 5268 Malvidae
Ciclev10004730m C. clementina v1.0 124240984 lycopene cyclase 1 5268 Malvidae
Lus10027278 L. usitatissimum v1.0 124240984 lycopene cyclase 2 5268 Malvidae
Gorai.013G002400.1 G. raimondii v2.1 124240984 lycopene cyclase 1 5268 Malvidae
Thecc1EG024409t1 T. cacao v1.1 124240984 lycopene cyclase 1 5268 Malvidae
Araha.1295s0006.1.p A. halleri v1.1 124240984 lycopene cyclase 1 5268 Malvidae
Brara.E03030.1.p B. rapa FPsc v1.3 124240984 lycopene cyclase 1 5268 Malvidae
Bostr.22252s0039.1.p B. stricta v1.2 124240984 lycopene cyclase 1 5268 Malvidae
Manes.09G008200.1.p M. esculenta v6.1 124240984 lycopene cyclase 1 5268 Malvidae
AL3G21570.t1 A. lyrata v2.1 124240984 lycopene cyclase 1 5268 Malvidae
Potri.016G040200.6.p P. trichocarpa v3.1 124240984 lycopene cyclase 3 5268 Malvidae
Potri.006G043100.1.p P. trichocarpa v3.1 124240984 lycopene cyclase 3 5268 Malvidae
Podel.06G043900.1.p P. deltoides WV94 v2.1 124240984 lycopene cyclase 3 5268 Malvidae
Podel.16G043300.1.p P. deltoides WV94 v2.1 124240984 lycopene cyclase 3 5268 Malvidae
Podel.06G043400.1.p P. deltoides WV94 v2.1 124240984 lycopene cyclase 3 5268 Malvidae
Carub.0003s0940.1.p C. rubella v1.1 124240984 lycopene cyclase 1 5268 Malvidae