Cucsa.056550
|
(1 of 14) PF07727//PF13976 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
C. sativus v1.0
|
|
2821
|
scaffold00603: 120536-123356 |
Cucsa.162290
|
(1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON |
C. sativus v1.0
|
|
4357
|
scaffold01144: 1979013-1983369 |
Thecc1EG027093
|
(1 of 10) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) |
T. cacao v1.1
|
|
5034
|
scaffold_6: 1357601-1362634 |
Tp57577_TGAC_v2_gene4974
|
(1 of 3) PF07727//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) |
T. pratense v2
|
|
5373
|
Tp57577_TGAC_v2_LG4: 28487960-28493332 |
Tp57577_TGAC_v2_gene19091
|
(1 of 6) PF00665//PF07727//PF13976 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
T. pratense v2
|
|
4764
|
Tp57577_TGAC_v2_LG6: 6744528-6749291 |
Tp57577_TGAC_v2_gene8161
|
(1 of 3) PF07727//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) |
T. pratense v2
|
|
7095
|
Tp57577_TGAC_v2_LG2: 21482038-21489132 |
MD17G1109500
|
(1 of 1) PF00665//PF14223 - Integrase core domain (rve) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
3671
|
Chr17: 9418867-9422537 |
MD17G1115400
|
(1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
4229
|
Chr17: 9851094-9855322 |
MD16G1247000
|
(1 of 1) PF00665//PF07727//PF09758//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Uncharacterised conserved protein (FPL) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
16872
|
Chr16: 27407107-27423978 |
MD17G1248200
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
4648
|
Chr17: 29696258-29700905 |
MD09G1100700
|
(1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
4248
|
Chr09: 7359941-7364188 |
MD00G1084700
|
(1 of 1) PF00079//PF00665//PF07727//PF13976//PF14223 - Serpin (serine protease inhibitor) (Serpin) // Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
5620
|
Chr00: 16967196-16972815 |
MD00G1024600
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
4128
|
Chr00: 3996174-4000301 |
MD03G1056000
|
(1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
5583
|
Chr03: 4438156-4443738 |
MD11G1146000
|
(1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
4311
|
Chr11: 13695726-13700036 |
MD02G1303700
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
4201
|
Chr02: 35737057-35741257 |
MD13G1050200
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
4769
|
Chr13: 3554311-3559079 |
MD12G1185900
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
4008
|
Chr12: 26748009-26752016 |
MD11G1197500
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
5349
|
Chr11: 28335178-28340526 |
MD04G1231400
|
(1 of 6) PF00665//PF07727//PF13976 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
M. domestica v1.1
|
|
4923
|
Chr04: 31095469-31100391 |
MD05G1032500
|
(1 of 70) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED |
M. domestica v1.1
|
|
2861
|
Chr05: 5305689-5308549 |
MD05G1050400
|
(1 of 1) PF07727//PF13839 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) |
M. domestica v1.1
|
|
4458
|
Chr05: 8735903-8740360 |
MD12G1052500
|
(1 of 1) PF00665//PF07727//PF07993//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Male sterility protein (NAD_binding_4) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
6158
|
Chr12: 5908852-5915009 |
MD12G1020900
|
(1 of 1) PF00005//PF00665//PF01061//PF07727//PF13976//PF14223 - ABC transporter (ABC_tran) // Integrase core domain (rve) // ABC-2 type transporter (ABC2_membrane) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
7203
|
Chr12: 2100055-2107257 |
MD05G1187300
|
(1 of 2) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) |
M. domestica v1.1
|
|
4812
|
Chr05: 31546339-31551150 |
MD05G1333300
|
(1 of 4) PF13976//PF14223 - GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
4887
|
Chr05: 45664080-45668966 |
MD14G1067200
|
(1 of 2) PF00665//PF13976//PF14223 - Integrase core domain (rve) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) |
M. domestica v1.1
|
|
4128
|
Chr14: 7285001-7289128 |
MD14G1225200
|
(1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
4320
|
Chr14: 30626086-30630405 |
MD14G1189500
|
(1 of 1) PF07727//PF14244 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2_3) |
M. domestica v1.1
|
|
3760
|
Chr14: 28103347-28107106 |
gene16042-v1.0-hybrid
|
(1 of 2) PF00665//PF07727//PF13976 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) |
F. vesca v2.0.a2
|
|
3729
|
Fvb5: 6528180-6531908 |