Gene : Cucsa.162290 C. sativus v1.0
Defline:  (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON Genomic Order:  261
Name:  ? Cucsa.162290 Secondary Identifier:  ? PAC:16965655
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.162290 0.5kb upstream 0.5kb upstream 4857 true scaffold01144: 1978513-1983369 Cucumis sativus
Cucsa.162290 0.5kb upstream 0.5kb upstream 500 false scaffold01144: 1978513-1979012 Cucumis sativus
Cucsa.162290 0.5kb downstream 0.5kb downstream 4857 true scaffold01144: 1979013-1983869 Cucumis sativus
Cucsa.162290 0.5kb downstream 0.5kb downstream 500 false scaffold01144: 1983370-1983869 Cucumis sativus
Cucsa.162290 1.0kb upstream 1.0kb upstream 5357 true scaffold01144: 1978013-1983369 Cucumis sativus
Cucsa.162290 1.0kb upstream 1.0kb upstream 1000 false scaffold01144: 1978013-1979012 Cucumis sativus
Cucsa.162290 1.0kb downstream 1.0kb downstream 5357 true scaffold01144: 1979013-1984369 Cucumis sativus
Cucsa.162290 1.0kb downstream 1.0kb downstream 1000 false scaffold01144: 1983370-1984369 Cucumis sativus
Cucsa.162290 2.0kb upstream 2.0kb upstream 6357 true scaffold01144: 1977013-1983369 Cucumis sativus
Cucsa.162290 2.0kb upstream 2.0kb upstream 2000 false scaffold01144: 1977013-1979012 Cucumis sativus
Cucsa.162290 2.0kb downstream 2.0kb downstream 6357 true scaffold01144: 1979013-1985369 Cucumis sativus
Cucsa.162290 2.0kb downstream 2.0kb downstream 2000 false scaffold01144: 1983370-1985369 Cucumis sativus
Cucsa.162290 5.0kb upstream 5.0kb upstream 9357 true scaffold01144: 1974013-1983369 Cucumis sativus
Cucsa.162290 5.0kb upstream 5.0kb upstream 5000 false scaffold01144: 1974013-1979012 Cucumis sativus
Cucsa.162290 5.0kb downstream 5.0kb downstream 9357 true scaffold01144: 1979013-1988369 Cucumis sativus
Cucsa.162290 5.0kb downstream 5.0kb downstream 5000 false scaffold01144: 1983370-1988369 Cucumis sativus
Cucsa.162290 10.0kb upstream 10.0kb upstream 14357 true scaffold01144: 1969013-1983369 Cucumis sativus
Cucsa.162290 10.0kb upstream 10.0kb upstream 10000 false scaffold01144: 1969013-1979012 Cucumis sativus
Cucsa.162290 10.0kb downstream 10.0kb downstream 14357 true scaffold01144: 1979013-1993369 Cucumis sativus
Cucsa.162290 10.0kb downstream 10.0kb downstream 10000 false scaffold01144: 1983370-1993369 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782523 5273 Angiosperm View MSA
122231448 5265 Fabidae View MSA
124041093 5270 Rosid View MSA
123753055 5271 Pentapetalae View MSA
122774934 5272 Eudicot View MSA
121054037 5274 Embryophyte View MSA
123094036 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain