Protein Family : Transporter, ABC superfamily (Breast cancer resistance protein) 123753055

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  32
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32 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
Cucsa.056550 (1 of 14) PF07727//PF13976 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) C. sativus v1.0 2821   scaffold00603: 120536-123356
Cucsa.162290 (1 of 85) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON C. sativus v1.0 4357   scaffold01144: 1979013-1983369
Thecc1EG027093 (1 of 10) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) T. cacao v1.1 5034   scaffold_6: 1357601-1362634
Tp57577_TGAC_v2_gene4974 (1 of 3) PF07727//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) T. pratense v2 5373   Tp57577_TGAC_v2_LG4: 28487960-28493332
Tp57577_TGAC_v2_gene19091 (1 of 6) PF00665//PF07727//PF13976 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) T. pratense v2 4764   Tp57577_TGAC_v2_LG6: 6744528-6749291
Tp57577_TGAC_v2_gene8161 (1 of 3) PF07727//PF14223 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2) T. pratense v2 7095   Tp57577_TGAC_v2_LG2: 21482038-21489132
MD17G1109500 (1 of 1) PF00665//PF14223 - Integrase core domain (rve) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 3671   Chr17: 9418867-9422537
MD17G1115400 (1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 4229   Chr17: 9851094-9855322
MD16G1247000 (1 of 1) PF00665//PF07727//PF09758//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Uncharacterised conserved protein (FPL) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 16872   Chr16: 27407107-27423978
MD17G1248200 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 4648   Chr17: 29696258-29700905
MD09G1100700 (1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 4248   Chr09: 7359941-7364188
MD00G1084700 (1 of 1) PF00079//PF00665//PF07727//PF13976//PF14223 - Serpin (serine protease inhibitor) (Serpin) // Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 5620   Chr00: 16967196-16972815
MD00G1024600 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 4128   Chr00: 3996174-4000301
MD03G1056000 (1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 5583   Chr03: 4438156-4443738
MD11G1146000 (1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 4311   Chr11: 13695726-13700036
MD02G1303700 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 4201   Chr02: 35737057-35741257
MD13G1050200 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 4769   Chr13: 3554311-3559079
MD12G1185900 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 4008   Chr12: 26748009-26752016
MD11G1197500 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 5349   Chr11: 28335178-28340526
MD04G1231400 (1 of 6) PF00665//PF07727//PF13976 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) M. domestica v1.1 4923   Chr04: 31095469-31100391
MD05G1032500 (1 of 70) PTHR11439//PTHR11439:SF185 - GAG-POL-RELATED RETROTRANSPOSON // SUBFAMILY NOT NAMED M. domestica v1.1 2861   Chr05: 5305689-5308549
MD05G1050400 (1 of 1) PF07727//PF13839 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) M. domestica v1.1 4458   Chr05: 8735903-8740360
MD12G1052500 (1 of 1) PF00665//PF07727//PF07993//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // Male sterility protein (NAD_binding_4) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 6158   Chr12: 5908852-5915009
MD12G1020900 (1 of 1) PF00005//PF00665//PF01061//PF07727//PF13976//PF14223 - ABC transporter (ABC_tran) // Integrase core domain (rve) // ABC-2 type transporter (ABC2_membrane) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 7203   Chr12: 2100055-2107257
MD05G1187300 (1 of 2) PF00665//PF07727 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) M. domestica v1.1 4812   Chr05: 31546339-31551150
MD05G1333300 (1 of 4) PF13976//PF14223 - GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 4887   Chr05: 45664080-45668966
MD14G1067200 (1 of 2) PF00665//PF13976//PF14223 - Integrase core domain (rve) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) M. domestica v1.1 4128   Chr14: 7285001-7289128
MD14G1225200 (1 of 8) PF00665//PF07727//PF13976//PF14244 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 4320   Chr14: 30626086-30630405
MD14G1189500 (1 of 1) PF07727//PF14244 - Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // gag-polypeptide of LTR copia-type (UBN2_3) M. domestica v1.1 3760   Chr14: 28103347-28107106
HanXRQChr07g0187191 (1 of 1) PF00665//PF00702//PF07727//PF13976//PF14223 - Integrase core domain (rve) // haloacid dehalogenase-like hydrolase (Hydrolase) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) H. annuus r1.2 4785   HanXRQChr07: 6959861-6964645

32 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
MD13G1050200 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD09G1100700 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD03G1056000 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD16G1247000 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD04G1231400 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD12G1020900 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD00G1084700 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD00G1024600 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD17G1115400 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD05G1032500 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD05G1187300 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD11G1197500 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
HanXRQChr07g0187191 H. annuus r1.2 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 2 5271 Pentapetalae
gene16042-v1.0-hybrid.t1 F. vesca v2.0.a2 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 1 5271 Pentapetalae
Cucsa.162290.1 C. sativus v1.0 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 2 5271 Pentapetalae
Cucsa.056550.1 C. sativus v1.0 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 2 5271 Pentapetalae
Thecc1EG027093t1 T. cacao v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 1 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA8439 T. pratense v2 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 3 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA5145 T. pratense v2 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 3 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA19749 T. pratense v2 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 3 5271 Pentapetalae
MD12G1052500 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD17G1109500 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD17G1248200 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD14G1067200 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD14G1189500 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD05G1050400 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD11G1146000 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD05G1333300 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD14G1225200 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae
MD02G1303700 M. domestica v1.1 123753055 Transporter, ABC superfamily (Breast cancer resistance protein) 23 5271 Pentapetalae