Gene : MD09G1100700 M. domestica v1.1
Defline:  (1 of 7) PF00665//PF07727//PF13976//PF14223 - Integrase core domain (rve) // Reverse transcriptase (RNA-dependent DNA polymerase) (RVT_2) // GAG-pre-integrase domain (gag_pre-integrs) // gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  902
Name:  ? MD09G1100700 Secondary Identifier:  ? PAC:40105435
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MD09G1100700 0.5kb upstream 0.5kb upstream 4748 true Chr09: 7359941-7364688 Malus domestica
MD09G1100700 0.5kb upstream 0.5kb upstream 500 false Chr09: 7364189-7364688 Malus domestica
MD09G1100700 0.5kb downstream 0.5kb downstream 4748 true Chr09: 7359441-7364188 Malus domestica
MD09G1100700 0.5kb downstream 0.5kb downstream 500 false Chr09: 7359441-7359940 Malus domestica
MD09G1100700 1.0kb upstream 1.0kb upstream 5248 true Chr09: 7359941-7365188 Malus domestica
MD09G1100700 1.0kb upstream 1.0kb upstream 1000 false Chr09: 7364189-7365188 Malus domestica
MD09G1100700 1.0kb downstream 1.0kb downstream 5248 true Chr09: 7358941-7364188 Malus domestica
MD09G1100700 1.0kb downstream 1.0kb downstream 1000 false Chr09: 7358941-7359940 Malus domestica
MD09G1100700 2.0kb upstream 2.0kb upstream 6248 true Chr09: 7359941-7366188 Malus domestica
MD09G1100700 2.0kb upstream 2.0kb upstream 2000 false Chr09: 7364189-7366188 Malus domestica
MD09G1100700 2.0kb downstream 2.0kb downstream 6248 true Chr09: 7357941-7364188 Malus domestica
MD09G1100700 2.0kb downstream 2.0kb downstream 2000 false Chr09: 7357941-7359940 Malus domestica
MD09G1100700 5.0kb upstream 5.0kb upstream 9248 true Chr09: 7359941-7369188 Malus domestica
MD09G1100700 5.0kb upstream 5.0kb upstream 5000 false Chr09: 7364189-7369188 Malus domestica
MD09G1100700 5.0kb downstream 5.0kb downstream 9248 true Chr09: 7354941-7364188 Malus domestica
MD09G1100700 5.0kb downstream 5.0kb downstream 5000 false Chr09: 7354941-7359940 Malus domestica
MD09G1100700 10.0kb upstream 10.0kb upstream 14248 true Chr09: 7359941-7374188 Malus domestica
MD09G1100700 10.0kb upstream 10.0kb upstream 10000 false Chr09: 7364189-7374188 Malus domestica
MD09G1100700 10.0kb downstream 10.0kb downstream 14248 true Chr09: 7349941-7364188 Malus domestica
MD09G1100700 10.0kb downstream 10.0kb downstream 10000 false Chr09: 7349941-7359940 Malus domestica

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782523 5273 Angiosperm View MSA
122231448 5265 Fabidae View MSA
124041093 5270 Rosid View MSA
123753055 5271 Pentapetalae View MSA
122774934 5272 Eudicot View MSA
121054037 5274 Embryophyte View MSA
123094036 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain