Protein Family : zinc finger, C3HC4 type, putative, expressed 123428817

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  405

339 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29813.t000039 (1 of 1) PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED R. communis v0.1 2973   29813: 238592-241564
30138.t000251 (1 of 1) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED R. communis v0.1 3487   30138: 1681067-1684553
29048.t000003 (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED R. communis v0.1 2538   29048: 11222-13759
28748.t000001 (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED R. communis v0.1 3360   28748: 3877-7236
29641.t000028 (1 of 1) PTHR23012//PTHR23012:SF94 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED R. communis v0.1 5660   29641: 166881-172540
Cucsa.108460 (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER C. sativus v1.0 5017   scaffold00931: 597821-602837
Cucsa.112790 (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER C. sativus v1.0 3897   scaffold00953: 1194621-1198517
Cucsa.189560 (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER C. sativus v1.0 4392   scaffold01305: 399223-403614
Cucsa.280410 (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER C. sativus v1.0 2491   scaffold02633: 350366-352856
Cucsa.285080 (1 of 1) PTHR23012//PTHR23012:SF73 - MEMBRANE ASSOCIATED RING FINGER C. sativus v1.0 2403   scaffold02653: 1559370-1561772
orange1.1g037907m.g (1 of 1) PTHR23012//PTHR23012:SF94 - MEMBRANE ASSOCIATED RING FINGER C. sinensis v1.1 3013   scaffold00037: 489451-492463
orange1.1g024200m.g (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER C. sinensis v1.1 3216   scaffold00034: 847663-850878
orange1.1g023641m.g (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER C. sinensis v1.1 3674   scaffold00042: 235160-238833
orange1.1g023293m.g (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER C. sinensis v1.1 3308   scaffold00003: 3012053-3015360
orange1.1g039690m.g (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER C. sinensis v1.1 3014   scaffold00111: 315956-318969
AT5G38070 (1 of 1) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A. thaliana TAIR10 1461   Chr5: 15190229-15191689
AT5G62460 (1 of 1) PTHR23012//PTHR23012:SF96 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A. thaliana TAIR10 2412   Chr5: 25074883-25077294
AT3G47550 (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A. thaliana TAIR10 2083   Chr3: 17523458-17525540
AT1G14260 (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A. thaliana TAIR10 2052   Chr1: 4872856-4874907
AT2G02960 (1 of 1) PTHR23012//PTHR23012:SF91 - MEMBRANE ASSOCIATED RING FINGER // RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEIN A. thaliana TAIR10 2361   Chr2: 862087-864447
AT2G01275 (1 of 1) PTHR23012//PTHR23012:SF100 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED A. thaliana TAIR10 2027   Chr2: 142498-144524
Thhalv10027893m.g (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER E. salsugineum v1.0 1390   scaffold_14: 6187956-6189345
Thhalv10010967m.g (1 of 3) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER E. salsugineum v1.0 2149   scaffold_16: 4363495-4365643
Thhalv10001001m.g (1 of 1) PTHR23012//PTHR23012:SF100 - MEMBRANE ASSOCIATED RING FINGER E. salsugineum v1.0 1145   scaffold_20: 2563425-2564569
Thhalv10008459m.g (1 of 3) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER E. salsugineum v1.0 1929   scaffold_5: 10599610-10601538
Thhalv10004664m.g (1 of 1) PTHR23012//PTHR23012:SF96 - MEMBRANE ASSOCIATED RING FINGER E. salsugineum v1.0 2365   scaffold_6: 2039155-2041519
Thhalv10004698m.g (1 of 3) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER E. salsugineum v1.0 2743   scaffold_6: 7114006-7116748
Ciclev10012424m.g (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER C. clementina v1.0 3632   scaffold_6: 22748169-22751800
Ciclev10021492m.g (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER C. clementina v1.0 4381   scaffold_3: 7248627-7253007
Ciclev10021736m.g (1 of 2) PTHR23012//PTHR23012:SF94 - MEMBRANE ASSOCIATED RING FINGER C. clementina v1.0 3958   scaffold_3: 36588159-36592116

405 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
AT5G38070.1 A. thaliana TAIR10 123428817 zinc finger, C3HC4 type, putative, expressed 7 5275 Viridiplantae
Lus10004058 L. usitatissimum v1.0 123428817 zinc finger, C3HC4 type, putative, expressed 14 5275 Viridiplantae
Glyma.20G124800.1.p G. max Wm82.a2.v1 123428817 zinc finger, C3HC4 type, putative, expressed 11 5275 Viridiplantae
Brara.I04999.1.p B. rapa FPsc v1.3 123428817 zinc finger, C3HC4 type, putative, expressed 11 5275 Viridiplantae
SapurV1A.0728s0100.1.p S. purpurea v1.0 123428817 zinc finger, C3HC4 type, putative, expressed 12 5275 Viridiplantae
SapurV1A.1200s0010.1.p S. purpurea v1.0 123428817 zinc finger, C3HC4 type, putative, expressed 12 5275 Viridiplantae
evm_27.model.AmTr_v1.0_scaffold00105.61 A. trichopoda v1.0 123428817 zinc finger, C3HC4 type, putative, expressed 4 5275 Viridiplantae
GSMUA_Achr3P01280_001 M. acuminata v1 123428817 zinc finger, C3HC4 type, putative, expressed 13 5275 Viridiplantae
GSMUA_AchrUn_randomP16390_001 M. acuminata v1 123428817 zinc finger, C3HC4 type, putative, expressed 13 5275 Viridiplantae
GSMUA_Achr2P14560_001 M. acuminata v1 123428817 zinc finger, C3HC4 type, putative, expressed 13 5275 Viridiplantae
Manes.02G073300.1.p M. esculenta v6.1 123428817 zinc finger, C3HC4 type, putative, expressed 10 5275 Viridiplantae
Kalax.0039s0083.1.p K. laxiflora v1.1 123428817 zinc finger, C3HC4 type, putative, expressed 12 5275 Viridiplantae
Seita.5G082500.1.p S. italica v2.2 123428817 zinc finger, C3HC4 type, putative, expressed 7 5275 Viridiplantae
Seita.1G207400.1.p S. italica v2.2 123428817 zinc finger, C3HC4 type, putative, expressed 7 5275 Viridiplantae
Aco021250.1 A. comosus v3 123428817 zinc finger, C3HC4 type, putative, expressed 6 5275 Viridiplantae
LOC_Os02g36740.1 O. sativa v7.0 123428817 zinc finger, C3HC4 type, putative, expressed 6 5275 Viridiplantae
Solyc04g007600.2.1 S. lycopersicum ITAG2.4 123428817 zinc finger, C3HC4 type, putative, expressed 8 5275 Viridiplantae
AUR62041245-RA C. quinoa v1.0 123428817 zinc finger, C3HC4 type, putative, expressed 8 5275 Viridiplantae
Potri.010G115600.3.p P. trichocarpa v3.1 123428817 zinc finger, C3HC4 type, putative, expressed 13 5275 Viridiplantae
Potri.017G122300.4.p P. trichocarpa v3.1 123428817 zinc finger, C3HC4 type, putative, expressed 13 5275 Viridiplantae
Podel.17G131100.1.p P. deltoides WV94 v2.1 123428817 zinc finger, C3HC4 type, putative, expressed 11 5275 Viridiplantae
Pavir.1NG317100.1.p P. virgatum v4.1 123428817 zinc finger, C3HC4 type, putative, expressed 13 5275 Viridiplantae
Sobic.004G190700.3.p S. bicolor v3.1.1 123428817 zinc finger, C3HC4 type, putative, expressed 6 5275 Viridiplantae
Zm00001d050884_P004 Z. mays RefGen_V4 123428817 zinc finger, C3HC4 type, putative, expressed 8 5275 Viridiplantae
OsKitaake02g219500.2.p O. sativa Kitaake v3.1 123428817 zinc finger, C3HC4 type, putative, expressed 7 5275 Viridiplantae
gene04039-v1.0-hybrid.t1 F. vesca v2.0.a2 123428817 zinc finger, C3HC4 type, putative, expressed 4 5275 Viridiplantae
29048.m000065 R. communis v0.1 123428817 zinc finger, C3HC4 type, putative, expressed 5 5275 Viridiplantae
29641.m000403 R. communis v0.1 123428817 zinc finger, C3HC4 type, putative, expressed 5 5275 Viridiplantae
28748.m000207 R. communis v0.1 123428817 zinc finger, C3HC4 type, putative, expressed 5 5275 Viridiplantae
29813.m001487 R. communis v0.1 123428817 zinc finger, C3HC4 type, putative, expressed 5 5275 Viridiplantae