Gene : orange1.1g039690m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  44
Name:  ? orange1.1g039690m.g Secondary Identifier:  ? PAC:18130402
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039690m.g 0.5kb upstream 0.5kb upstream 3514 true scaffold00111: 315456-318969 Citrus sinensis
orange1.1g039690m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00111: 315456-315955 Citrus sinensis
orange1.1g039690m.g 0.5kb downstream 0.5kb downstream 3514 true scaffold00111: 315956-319469 Citrus sinensis
orange1.1g039690m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00111: 318970-319469 Citrus sinensis
orange1.1g039690m.g 1.0kb upstream 1.0kb upstream 4014 true scaffold00111: 314956-318969 Citrus sinensis
orange1.1g039690m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00111: 314956-315955 Citrus sinensis
orange1.1g039690m.g 1.0kb downstream 1.0kb downstream 4014 true scaffold00111: 315956-319969 Citrus sinensis
orange1.1g039690m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00111: 318970-319969 Citrus sinensis
orange1.1g039690m.g 2.0kb upstream 2.0kb upstream 5014 true scaffold00111: 313956-318969 Citrus sinensis
orange1.1g039690m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00111: 313956-315955 Citrus sinensis
orange1.1g039690m.g 2.0kb downstream 2.0kb downstream 5014 true scaffold00111: 315956-320969 Citrus sinensis
orange1.1g039690m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00111: 318970-320969 Citrus sinensis
orange1.1g039690m.g 5.0kb upstream 5.0kb upstream 8014 true scaffold00111: 310956-318969 Citrus sinensis
orange1.1g039690m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00111: 310956-315955 Citrus sinensis
orange1.1g039690m.g 5.0kb downstream 5.0kb downstream 8014 true scaffold00111: 315956-323969 Citrus sinensis
orange1.1g039690m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00111: 318970-323969 Citrus sinensis
orange1.1g039690m.g 10.0kb upstream 10.0kb upstream 13014 true scaffold00111: 305956-318969 Citrus sinensis
orange1.1g039690m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00111: 305956-315955 Citrus sinensis
orange1.1g039690m.g 10.0kb downstream 10.0kb downstream 13014 true scaffold00111: 315956-328969 Citrus sinensis
orange1.1g039690m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00111: 318970-328969 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340031 5266 SBM View MSA
124251215 5268 Malvidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain