Gene : AT2G01275 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23012//PTHR23012:SF100 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED Genomic Order:  26
Name:  ? AT2G01275 Secondary Identifier:  ? PAC:19639491
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT2G01275 0.5kb upstream 0.5kb upstream 2527 true Chr2: 142498-145024 Arabidopsis thaliana
AT2G01275 0.5kb upstream 0.5kb upstream 500 false Chr2: 144525-145024 Arabidopsis thaliana
AT2G01275 0.5kb downstream 0.5kb downstream 2527 true Chr2: 141998-144524 Arabidopsis thaliana
AT2G01275 0.5kb downstream 0.5kb downstream 500 false Chr2: 141998-142497 Arabidopsis thaliana
AT2G01275 1.0kb upstream 1.0kb upstream 3027 true Chr2: 142498-145524 Arabidopsis thaliana
AT2G01275 1.0kb upstream 1.0kb upstream 1000 false Chr2: 144525-145524 Arabidopsis thaliana
AT2G01275 1.0kb downstream 1.0kb downstream 3027 true Chr2: 141498-144524 Arabidopsis thaliana
AT2G01275 1.0kb downstream 1.0kb downstream 1000 false Chr2: 141498-142497 Arabidopsis thaliana
AT2G01275 2.0kb upstream 2.0kb upstream 4027 true Chr2: 142498-146524 Arabidopsis thaliana
AT2G01275 2.0kb upstream 2.0kb upstream 2000 false Chr2: 144525-146524 Arabidopsis thaliana
AT2G01275 2.0kb downstream 2.0kb downstream 4027 true Chr2: 140498-144524 Arabidopsis thaliana
AT2G01275 2.0kb downstream 2.0kb downstream 2000 false Chr2: 140498-142497 Arabidopsis thaliana
AT2G01275 5.0kb upstream 5.0kb upstream 7027 true Chr2: 142498-149524 Arabidopsis thaliana
AT2G01275 5.0kb upstream 5.0kb upstream 5000 false Chr2: 144525-149524 Arabidopsis thaliana
AT2G01275 5.0kb downstream 5.0kb downstream 7027 true Chr2: 137498-144524 Arabidopsis thaliana
AT2G01275 5.0kb downstream 5.0kb downstream 5000 false Chr2: 137498-142497 Arabidopsis thaliana
AT2G01275 10.0kb upstream 10.0kb upstream 12027 true Chr2: 142498-154524 Arabidopsis thaliana
AT2G01275 10.0kb upstream 10.0kb upstream 10000 false Chr2: 144525-154524 Arabidopsis thaliana
AT2G01275 10.0kb downstream 10.0kb downstream 12027 true Chr2: 132498-144524 Arabidopsis thaliana
AT2G01275 10.0kb downstream 10.0kb downstream 10000 false Chr2: 132498-142497 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041328 5273 Angiosperm View MSA
122368143 5261 Brassicaceae View MSA
123835884 5264 Brassicales-Malvales View MSA
124347757 5266 SBM View MSA
124250999 5268 Malvidae View MSA
124072667 5270 Rosid View MSA
123750896 5271 Pentapetalae View MSA
122789616 5272 Eudicot View MSA
121309830 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.203     Low  
cufflinks 0.779        
cufflinks 0.107     Low  
cufflinks 0.925        
cufflinks 0.069     Low Low
cufflinks 1.38       High

0 Strain