Gene : Cucsa.108460 C. sativus v1.0
Defline:  (1 of 2) PTHR23012//PTHR23012:SF89 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  78
Name:  ? Cucsa.108460 Secondary Identifier:  ? PAC:16959739
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csativus PWY-7511 Cucumis sativus pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cucsa.108460 0.5kb upstream 0.5kb upstream 5517 true scaffold00931: 597821-603337 Cucumis sativus
Cucsa.108460 0.5kb upstream 0.5kb upstream 500 false scaffold00931: 602838-603337 Cucumis sativus
Cucsa.108460 0.5kb downstream 0.5kb downstream 5517 true scaffold00931: 597321-602837 Cucumis sativus
Cucsa.108460 0.5kb downstream 0.5kb downstream 500 false scaffold00931: 597321-597820 Cucumis sativus
Cucsa.108460 1.0kb upstream 1.0kb upstream 6017 true scaffold00931: 597821-603837 Cucumis sativus
Cucsa.108460 1.0kb upstream 1.0kb upstream 1000 false scaffold00931: 602838-603837 Cucumis sativus
Cucsa.108460 1.0kb downstream 1.0kb downstream 6017 true scaffold00931: 596821-602837 Cucumis sativus
Cucsa.108460 1.0kb downstream 1.0kb downstream 1000 false scaffold00931: 596821-597820 Cucumis sativus
Cucsa.108460 2.0kb upstream 2.0kb upstream 7017 true scaffold00931: 597821-604837 Cucumis sativus
Cucsa.108460 2.0kb upstream 2.0kb upstream 2000 false scaffold00931: 602838-604837 Cucumis sativus
Cucsa.108460 2.0kb downstream 2.0kb downstream 7017 true scaffold00931: 595821-602837 Cucumis sativus
Cucsa.108460 2.0kb downstream 2.0kb downstream 2000 false scaffold00931: 595821-597820 Cucumis sativus
Cucsa.108460 5.0kb upstream 5.0kb upstream 10017 true scaffold00931: 597821-607837 Cucumis sativus
Cucsa.108460 5.0kb upstream 5.0kb upstream 5000 false scaffold00931: 602838-607837 Cucumis sativus
Cucsa.108460 5.0kb downstream 5.0kb downstream 10017 true scaffold00931: 592821-602837 Cucumis sativus
Cucsa.108460 5.0kb downstream 5.0kb downstream 5000 false scaffold00931: 592821-597820 Cucumis sativus
Cucsa.108460 10.0kb upstream 10.0kb upstream 15017 true scaffold00931: 597821-612837 Cucumis sativus
Cucsa.108460 10.0kb upstream 10.0kb upstream 10000 false scaffold00931: 602838-612837 Cucumis sativus
Cucsa.108460 10.0kb downstream 10.0kb downstream 15017 true scaffold00931: 587821-602837 Cucumis sativus
Cucsa.108460 10.0kb downstream 10.0kb downstream 10000 false scaffold00931: 587821-597820 Cucumis sativus

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041328 5273 Angiosperm View MSA
122236874 5265 Fabidae View MSA
124072667 5270 Rosid View MSA
123750896 5271 Pentapetalae View MSA
122789616 5272 Eudicot View MSA
121309830 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain