Protein Family : vacuolar protein sorting-associating protein 4B, putative, expressed 123428117

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  104

104 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29930.t000006 (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) R. communis v0.1 6108   29930: 171389-177496
30055.t000007 (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) R. communis v0.1 5093   30055: 54072-59164
Cucsa.385040 (1 of 2) PTHR23074:SF93 - F10A12.27/F10A12.27 C. sativus v1.0 5489   scaffold03904: 446983-452471
orange1.1g042771m.g (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 C. sinensis v1.1 3844   scaffold00082: 44018-47861
AT2G27600 (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) A. thaliana TAIR10 SKD1 2955   Chr2: 11781038-11783992
Thhalv10016678m.g (1 of 2) PTHR23074:SF93 - F10A12.27/F10A12.27 E. salsugineum v1.0 3026   scaffold_10: 1894113-1897138
Thhalv10007683m.g (1 of 2) PTHR23074:SF93 - F10A12.27/F10A12.27 E. salsugineum v1.0 2574   scaffold_5: 12982749-12985322
Ciclev10028483m.g (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 C. clementina v1.0 4340   scaffold_8: 19779795-19784134
Lus10004891.g (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 L. usitatissimum v1.0 3104   scaffold1821: 196497-199600
Lus10043381.g (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 L. usitatissimum v1.0 3134   scaffold25: 2610767-2613900
Lus10020589.g (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 L. usitatissimum v1.0 3990   scaffold77: 457000-460989
Lus10019537.g (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 L. usitatissimum v1.0 3189   scaffold906: 707766-710954
Gorai.001G121400 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. raimondii v2.1 5167   Chr01: 14812123-14817289
Gorai.004G009400 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. raimondii v2.1 4426   Chr04: 681763-686188
Gorai.009G086700 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. raimondii v2.1 5796   Chr09: 6297037-6302832
Gorai.006G111300 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. raimondii v2.1 6150   Chr06: 35802264-35808413
estExt_fgenesh1_pg.C_10151 (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 C. subellipsoidea C-169 v2.0 3789   scaffold_1: 1126399-1130187
fgenesh2_kg_18_num_23_num_4271501:1 (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 M. pusilla CCMP1545 v3.0 2452   scaffold_18: 203764-206215
AZW_EuGene.0900010498 (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 M. sp RCC299 v3.0 1449   Chr_09: 966688-968136
eugene.1000010065 (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 O. lucimarinus v2.0 1595   Chr_10: 114956-116550
Thecc1EG043963 (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) T. cacao v1.1 6149   scaffold_10r: 11528167-11534315
Thecc1EG041448 (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) T. cacao v1.1 7075   scaffold_9: 37703256-37710330
Migut.D02352 (1 of 2) PTHR23074:SF93 - F10A12.27/F10A12.27 M. guttatus v2.0 3664   scaffold_4: 19680364-19684027
Araha.1145s0002 (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 A. halleri v1.1 2830   Scaffold1145: 1734-4563
Cagra.2864s0004 (1 of 1) PTHR23074:SF93 - F10A12.27/F10A12.27 C. grandiflora v1.1 2972   Scaffold2864: 14986-17957
Glyma.11G184700 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. max Wm82.a2.v1 4285   Chr11: 25269153-25273437
Glyma.12G087700 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. max Wm82.a2.v1 4056   Chr12: 7164702-7168757
Glyma.12G183700 (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 G. max Wm82.a2.v1 6959   Chr12: 34470517-34477475
Brara.G01321 (1 of 3) PTHR23074:SF93 - F10A12.27/F10A12.27 B. rapa FPsc v1.3 2695   A07: 13813011-13815705
Brara.F00512 (1 of 3) PTHR23074:SF93 - F10A12.27/F10A12.27 B. rapa FPsc v1.3 2508   A06: 3100015-3102522

104 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30055.m001537 R. communis v0.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
29930.m000610 R. communis v0.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
Cucsa.385040.1 C. sativus v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
orange1.1g042771m C. sinensis v1.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
AT2G27600.1 A. thaliana TAIR10 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
Thhalv10016678m E. salsugineum v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
Thhalv10007683m E. salsugineum v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
Ciclev10028483m C. clementina v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
Lus10043381 L. usitatissimum v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Lus10019537 L. usitatissimum v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Lus10020589 L. usitatissimum v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Lus10004891 L. usitatissimum v1.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Gorai.006G111300.1 G. raimondii v2.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Gorai.009G086700.1 G. raimondii v2.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Gorai.004G009400.1 G. raimondii v2.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
Gorai.001G121400.1 G. raimondii v2.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 4 5275 Viridiplantae
45782 C. subellipsoidea C-169 v2.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
124412 M. pusilla CCMP1545 v3.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
113360 M. sp RCC299 v3.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
26031 O. lucimarinus v2.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
Thecc1EG043963t2 T. cacao v1.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
Thecc1EG041448t1 T. cacao v1.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
Migut.D02352.1.p M. guttatus v2.0 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
Araha.1145s0002.1.p A. halleri v1.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
Cagra.2864s0004.1.p C. grandiflora v1.1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 1 5275 Viridiplantae
Glyma.12G087700.1.p G. max Wm82.a2.v1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 3 5275 Viridiplantae
Glyma.11G184700.1.p G. max Wm82.a2.v1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 3 5275 Viridiplantae
Glyma.12G183700.1.p G. max Wm82.a2.v1 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 3 5275 Viridiplantae
Brara.G01321.1.p B. rapa FPsc v1.3 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae
Brara.F00512.1.p B. rapa FPsc v1.3 123428117 vacuolar protein sorting-associating protein 4B, putative, expressed 2 5275 Viridiplantae