Gene : Glyma.12G087700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23074:SF93 - F10A12.27/F10A12.27 Genomic Order:  877
Name:  ? Glyma.12G087700 Secondary Identifier:  ? PAC:30546312
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G087700 0.5kb upstream 0.5kb upstream 4556 true Chr12: 7164702-7169257 Glycine max
Glyma.12G087700 0.5kb upstream 0.5kb upstream 500 false Chr12: 7168758-7169257 Glycine max
Glyma.12G087700 0.5kb downstream 0.5kb downstream 4556 true Chr12: 7164202-7168757 Glycine max
Glyma.12G087700 0.5kb downstream 0.5kb downstream 500 false Chr12: 7164202-7164701 Glycine max
Glyma.12G087700 1.0kb upstream 1.0kb upstream 5056 true Chr12: 7164702-7169757 Glycine max
Glyma.12G087700 1.0kb upstream 1.0kb upstream 1000 false Chr12: 7168758-7169757 Glycine max
Glyma.12G087700 1.0kb downstream 1.0kb downstream 5056 true Chr12: 7163702-7168757 Glycine max
Glyma.12G087700 1.0kb downstream 1.0kb downstream 1000 false Chr12: 7163702-7164701 Glycine max
Glyma.12G087700 2.0kb upstream 2.0kb upstream 6056 true Chr12: 7164702-7170757 Glycine max
Glyma.12G087700 2.0kb upstream 2.0kb upstream 2000 false Chr12: 7168758-7170757 Glycine max
Glyma.12G087700 2.0kb downstream 2.0kb downstream 6056 true Chr12: 7162702-7168757 Glycine max
Glyma.12G087700 2.0kb downstream 2.0kb downstream 2000 false Chr12: 7162702-7164701 Glycine max
Glyma.12G087700 5.0kb upstream 5.0kb upstream 9056 true Chr12: 7164702-7173757 Glycine max
Glyma.12G087700 5.0kb upstream 5.0kb upstream 5000 false Chr12: 7168758-7173757 Glycine max
Glyma.12G087700 5.0kb downstream 5.0kb downstream 9056 true Chr12: 7159702-7168757 Glycine max
Glyma.12G087700 5.0kb downstream 5.0kb downstream 5000 false Chr12: 7159702-7164701 Glycine max
Glyma.12G087700 10.0kb upstream 10.0kb upstream 14056 true Chr12: 7164702-7178757 Glycine max
Glyma.12G087700 10.0kb upstream 10.0kb upstream 10000 false Chr12: 7168758-7178757 Glycine max
Glyma.12G087700 10.0kb downstream 10.0kb downstream 14056 true Chr12: 7154702-7168757 Glycine max
Glyma.12G087700 10.0kb downstream 10.0kb downstream 10000 false Chr12: 7154702-7164701 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040967 5273 Angiosperm View MSA
122311224 5265 Fabidae View MSA
124065448 5270 Rosid View MSA
123749867 5271 Pentapetalae View MSA
122796132 5272 Eudicot View MSA
121350779 5274 Embryophyte View MSA
123428117 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.6714 0.0 77.6273 High  
cufflinks 12.0104 0.0 32.2646   Low
cufflinks 24.0634 0.0 64.5236 High  
cufflinks 22.8167 0.0 61.1482 High  
cufflinks 18.4552 0.0 49.2737    
cufflinks 33.6682 0.0 92.1226 High High
cufflinks 17.6329 0.0 47.048    
cufflinks 18.9498 0.0 50.5854    
cufflinks 25.2356 0.0 67.8984 High  
cufflinks 7.043        
cufflinks 22.276     High High
cufflinks 8.092     High  
cufflinks 6.877        
cufflinks 4.574       Low
cufflinks 15.478     High  
cufflinks 6.201        
cufflinks 17.136     High High
cufflinks 7.008        
cufflinks 5.041       Low
cufflinks 7.674     High  
cufflinks 14.717     High  
cufflinks 7.334     High  
cufflinks 4.44       Low
cufflinks 20.797     High High
cufflinks 5.57        
cufflinks 16.356     High High

0 Strain