Gene : Thecc1EG043963 T. cacao v1.1
Defline:  (1 of 2) K12196 - vacuolar protein-sorting-associated protein 4 (VPS4) Genomic Order:  1060
Name:  ? Thecc1EG043963 Secondary Identifier:  ? PAC:27442938
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG043963 0.5kb upstream 0.5kb upstream 6649 true scaffold_10r: 11528167-11534815 Theobroma cacao
Thecc1EG043963 0.5kb upstream 0.5kb upstream 500 false scaffold_10r: 11534316-11534815 Theobroma cacao
Thecc1EG043963 0.5kb downstream 0.5kb downstream 6649 true scaffold_10r: 11527667-11534315 Theobroma cacao
Thecc1EG043963 0.5kb downstream 0.5kb downstream 500 false scaffold_10r: 11527667-11528166 Theobroma cacao
Thecc1EG043963 1.0kb upstream 1.0kb upstream 7149 true scaffold_10r: 11528167-11535315 Theobroma cacao
Thecc1EG043963 1.0kb upstream 1.0kb upstream 1000 false scaffold_10r: 11534316-11535315 Theobroma cacao
Thecc1EG043963 1.0kb downstream 1.0kb downstream 7149 true scaffold_10r: 11527167-11534315 Theobroma cacao
Thecc1EG043963 1.0kb downstream 1.0kb downstream 1000 false scaffold_10r: 11527167-11528166 Theobroma cacao
Thecc1EG043963 2.0kb upstream 2.0kb upstream 8149 true scaffold_10r: 11528167-11536315 Theobroma cacao
Thecc1EG043963 2.0kb upstream 2.0kb upstream 2000 false scaffold_10r: 11534316-11536315 Theobroma cacao
Thecc1EG043963 2.0kb downstream 2.0kb downstream 8149 true scaffold_10r: 11526167-11534315 Theobroma cacao
Thecc1EG043963 2.0kb downstream 2.0kb downstream 2000 false scaffold_10r: 11526167-11528166 Theobroma cacao
Thecc1EG043963 5.0kb upstream 5.0kb upstream 11149 true scaffold_10r: 11528167-11539315 Theobroma cacao
Thecc1EG043963 5.0kb upstream 5.0kb upstream 5000 false scaffold_10r: 11534316-11539315 Theobroma cacao
Thecc1EG043963 5.0kb downstream 5.0kb downstream 11149 true scaffold_10r: 11523167-11534315 Theobroma cacao
Thecc1EG043963 5.0kb downstream 5.0kb downstream 5000 false scaffold_10r: 11523167-11528166 Theobroma cacao
Thecc1EG043963 10.0kb upstream 10.0kb upstream 16149 true scaffold_10r: 11528167-11544315 Theobroma cacao
Thecc1EG043963 10.0kb upstream 10.0kb upstream 10000 false scaffold_10r: 11534316-11544315 Theobroma cacao
Thecc1EG043963 10.0kb downstream 10.0kb downstream 16149 true scaffold_10r: 11518167-11534315 Theobroma cacao
Thecc1EG043963 10.0kb downstream 10.0kb downstream 10000 false scaffold_10r: 11518167-11528166 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040967 5273 Angiosperm View MSA
123838634 5264 Brassicales-Malvales View MSA
124345021 5266 SBM View MSA
124239151 5268 Malvidae View MSA
124065448 5270 Rosid View MSA
123749867 5271 Pentapetalae View MSA
122796132 5272 Eudicot View MSA
121350779 5274 Embryophyte View MSA
123428117 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain