Gene : Glyma.13G145200 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  1452
Name:  ? Glyma.13G145200 Secondary Identifier:  ? PAC:30500110
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G145200 0.5kb upstream 0.5kb upstream 3960 true Chr13: 25821336-25825295 Glycine max
Glyma.13G145200 0.5kb upstream 0.5kb upstream 500 false Chr13: 25821336-25821835 Glycine max
Glyma.13G145200 0.5kb downstream 0.5kb downstream 3960 true Chr13: 25821836-25825795 Glycine max
Glyma.13G145200 0.5kb downstream 0.5kb downstream 500 false Chr13: 25825296-25825795 Glycine max
Glyma.13G145200 1.0kb upstream 1.0kb upstream 4460 true Chr13: 25820836-25825295 Glycine max
Glyma.13G145200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 25820836-25821835 Glycine max
Glyma.13G145200 1.0kb downstream 1.0kb downstream 4460 true Chr13: 25821836-25826295 Glycine max
Glyma.13G145200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 25825296-25826295 Glycine max
Glyma.13G145200 2.0kb upstream 2.0kb upstream 5460 true Chr13: 25819836-25825295 Glycine max
Glyma.13G145200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 25819836-25821835 Glycine max
Glyma.13G145200 2.0kb downstream 2.0kb downstream 5460 true Chr13: 25821836-25827295 Glycine max
Glyma.13G145200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 25825296-25827295 Glycine max
Glyma.13G145200 5.0kb upstream 5.0kb upstream 8460 true Chr13: 25816836-25825295 Glycine max
Glyma.13G145200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 25816836-25821835 Glycine max
Glyma.13G145200 5.0kb downstream 5.0kb downstream 8460 true Chr13: 25821836-25830295 Glycine max
Glyma.13G145200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 25825296-25830295 Glycine max
Glyma.13G145200 10.0kb upstream 10.0kb upstream 13460 true Chr13: 25811836-25825295 Glycine max
Glyma.13G145200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 25811836-25821835 Glycine max
Glyma.13G145200 10.0kb downstream 10.0kb downstream 13460 true Chr13: 25821836-25835295 Glycine max
Glyma.13G145200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 25825296-25835295 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040882 5273 Angiosperm View MSA
122300715 5265 Fabidae View MSA
124066117 5270 Rosid View MSA
123752208 5271 Pentapetalae View MSA
122797685 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 686.457 0.0 3429.15 High High
cufflinks 134.715 0.0 420.207 High  
cufflinks 46.7373 0.0 127.396 High  
cufflinks 54.3214 0.0 149.977 High  
cufflinks 55.9893 0.0 155.273 High  
cufflinks 22.0747 0.0 58.9194   Low
cufflinks 170.813 0.0 558.288 High  
cufflinks 104.022 0.0 311.204 High  
cufflinks 43.2927 0.0 117.576 High  
cufflinks 20.266     High  
cufflinks 4.433       Low
cufflinks 21.816     High  
cufflinks 9.67     High  
cufflinks 14.136     High  
cufflinks 19.945     High  
cufflinks 142.762     High High
cufflinks 2.404       Low
cufflinks 23.195     High  
cufflinks 40.41     High  
cufflinks 254.996     High High
cufflinks 9.223     High  
cufflinks 197.869     High High
cufflinks 107.265     High High
cufflinks 7.1     High  
cufflinks 171.081     High High
cufflinks 3.364       Low

0 Strain