Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 123752208

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  59

59 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30078.t000116 (1 of 3) K11294 - nucleolin (NCL, NSR1) R. communis v0.1 2612   30078: 746713-749324
Cucsa.050070 (1 of 163) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sativus v1.0 2619   scaffold00551: 202030-204648
Cucsa.306870 (1 of 15) KOG0131 - Splicing factor 3b, subunit 4 C. sativus v1.0 2100   scaffold02977: 262354-264453
AT2G37220 (1 of 3) K11294 - nucleolin (NCL, NSR1) A. thaliana TAIR10 1885   Chr2: 15634525-15636409
Thhalv10017023m.g (1 of 1) KOG0114//KOG0131//KOG0144//KOG4210 - Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein E. salsugineum v1.0 1914   scaffold_10: 9118388-9120301
Ciclev10012331m.g (1 of 24) KOG0131 - Splicing factor 3b, subunit 4 C. clementina v1.0 2398   scaffold_6: 10082734-10085131
Lus10023191.g (1 of 1) KOG0105//KOG0106//KOG0110//KOG0131 - Alternative splicing factor ASF/SF2 (RRM superfamily) // Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1447   scaffold325: 865961-867407
Lus10002222.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1400   scaffold499: 62332-63731
Lus10026514.g (1 of 37) KOG0131 - Splicing factor 3b, subunit 4 L. usitatissimum v1.0 1409   scaffold617: 192856-194264
Gorai.009G416900 (1 of 9) PF00076//PF14259 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) (RRM_6) G. raimondii v2.1 2838   Chr09: 64539378-64542215
Gorai.006G166300 (1 of 32) KOG0131 - Splicing factor 3b, subunit 4 G. raimondii v2.1 2649   Chr06: 42601213-42603861
Thecc1EG022172 (1 of 3) K11294 - nucleolin (NCL, NSR1) T. cacao v1.1 2945   scaffold_5: 2984190-2987134
Migut.J00538 (1 of 28) KOG0131 - Splicing factor 3b, subunit 4 M. guttatus v2.0 1966   scaffold_10: 2843942-2845907
Araha.14169s0015 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 A. halleri v1.1 1648   Scaffold14169: 46158-47805
Cagra.0666s0022 (1 of 25) KOG0131 - Splicing factor 3b, subunit 4 C. grandiflora v1.1 1877   Scaffold666: 84159-86035
Glyma.10G058500 (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 G. max Wm82.a2.v1 2682   Chr10: 5401666-5404347
Glyma.13G145200 (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 G. max Wm82.a2.v1 3460   Chr13: 25821836-25825295
Brara.D02261 (1 of 1) KOG0131//KOG0144 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) B. rapa FPsc v1.3 1629   A04: 18202348-18203976
Brara.E00783 (1 of 44) KOG0131 - Splicing factor 3b, subunit 4 B. rapa FPsc v1.3 1674   A05: 4532864-4534537
Brara.C01867 (1 of 1) KOG0131//KOG0144//KOG4210 - Splicing factor 3b, subunit 4 // RNA-binding protein CUGBP1/BRUNO (RRM superfamily) // Nuclear localization sequence binding protein B. rapa FPsc v1.3 1680   A03: 9218890-9220569
Bostr.23794s0362 (1 of 26) KOG0131 - Splicing factor 3b, subunit 4 B. stricta v1.2 1951   Scaffold23794: 2096553-2098503
Medtr1g064230 (1 of 20) KOG0131 - Splicing factor 3b, subunit 4 M. truncatula Mt4.0v1 1847   chr1: 28254735-28256581
SapurV1A.0141s0130 (1 of 8) K11294 - nucleolin (NCL, NSR1) S. purpurea v1.0 2790   chr06: 11954345-11957134
SapurV1A.1634s0020 (1 of 8) K11294 - nucleolin (NCL, NSR1) S. purpurea v1.0 2479   chr16: 6292663-6295141
Eucgr.K01243 (1 of 22) KOG0131 - Splicing factor 3b, subunit 4 E. grandis v2.0 2811   Chr11: 15872582-15875392
Prupe.6G235900 (1 of 22) KOG0131 - Splicing factor 3b, subunit 4 P. persica v2.1 2355   Pp06: 23672584-23674938
Manes.09G067800 (1 of 27) KOG0131 - Splicing factor 3b, subunit 4 M. esculenta v6.1 2845   Chromosome09: 9230759-9233603
Manes.08G008000 (1 of 27) KOG0131 - Splicing factor 3b, subunit 4 M. esculenta v6.1 2318   Chromosome08: 582167-584484
Kalax.1034s0006 (1 of 50) KOG0131 - Splicing factor 3b, subunit 4 K. laxiflora v1.1 2733   scaffold_1034: 79350-82082
Kalax.0317s0033 (1 of 50) KOG0131 - Splicing factor 3b, subunit 4 K. laxiflora v1.1 1824   scaffold_317: 295419-297242

59 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10017023m E. salsugineum v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Lus10002222 L. usitatissimum v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Migut.J00538.1.p M. guttatus v2.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Glyma.10G058500.1.p G. max Wm82.a2.v1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Brara.E00783.1.p B. rapa FPsc v1.3 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Medtr1g064230.2 M. truncatula Mt4.0v1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
SapurV1A.0141s0130.1.p S. purpurea v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Eucgr.K01243.1.p E. grandis v2.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Kalax.0063s0033.1.p K. laxiflora v1.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0317s0033.1.p K. laxiflora v1.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0742s0013.1.p K. laxiflora v1.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kaladp0002s0086.1.p K. fedtschenkoi v1.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Solyc09g007850.2.1 S. lycopersicum ITAG2.4 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Solyc10g086150.1.1 S. lycopersicum ITAG2.4 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Potri.006G127200.2.p P. trichocarpa v3.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
PGSC0003DMP400037385 S. tuberosum v4.03 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
PGSC0003DMP400030711 S. tuberosum v4.03 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Oeu045207.1 O. europaea v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Lsat_1_v5_gn_6_30901.1 L. sativa V8 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
MD04G1096600 M. domestica v1.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
MD12G1117600 M. domestica v1.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
HanXRQChr13g0400121 H. annuus r1.2 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
HanXRQChr02g0052341 H. annuus r1.2 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
30078.m002323 R. communis v0.1 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Cucsa.050070.1 C. sativus v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Cucsa.306870.1 C. sativus v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
AT2G37220.1 A. thaliana TAIR10 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Ciclev10012331m C. clementina v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 1 5271 Pentapetalae
Lus10023191 L. usitatissimum v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Lus10026514 L. usitatissimum v1.0 123752208 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae