Protein Family : RNA recognition motif containing protein, putative, expressed 123429142

Method ID:  5275 Method Name:  Viridiplantae
Sequence Alignment:  View MSA Member Count:  6607

5863 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29709.t000018 (1 of 1) PTHR24012:SF493 - RNA-BINDING PROTEIN 28 R. communis v0.1 4650   29709: 87888-92537
29706.t000078 (1 of 1) PTHR24012:SF318 - RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN R. communis v0.1 2651   29706: 658014-660664
29726.t000072 (1 of 1) PTHR23147//PTHR23147:SF7 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED R. communis v0.1 3956   29726: 447076-451031
29727.t000031 (1 of 3) K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) R. communis v0.1 5059   29727: 225357-230415
29739.t000162 (1 of 3) K13201 - nucleolysin TIA-1/TIAR (TIA1, TIAL1) R. communis v0.1 4662   29739: 1028754-1033415
29751.t000013 (1 of 1) PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED R. communis v0.1 2703   29751: 56319-59021
29784.t000016 (1 of 2) K12897 - transformer-2 protein (TRA2) R. communis v0.1 2438   29784: 141909-144346
29878.t000008 (1 of 11) KOG0148 - Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily) R. communis v0.1 2828   29878: 70213-73040
29889.t000089 (1 of 2) PTHR24012//PTHR24012:SF382 - FAMILY NOT NAMED // FLOWERING TIME CONTROL PROTEIN FCA-RELATED R. communis v0.1 11026   29889: 419417-430442
29905.t000003 (1 of 1) PTHR15744//PTHR15744:SF0 - BLOM7 // UPF0469 PROTEIN KIAA0907 R. communis v0.1 5962   29905: 24095-30056
29908.t000097 (1 of 9) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) R. communis v0.1 3506   29908: 1314502-1318007
29912.t000220 (1 of 1) PTHR23238 - RNA BINDING PROTEIN R. communis v0.1 4898   29912: 1444029-1448926
29929.t000280 (1 of 2) K14398 - cleavage and polyadenylation specificity factor subunit 6/7 (CPSF6_7) R. communis v0.1 3369   29929: 1588823-1592191
29948.t000013 (1 of 173) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) R. communis v0.1 884   29948: 137965-138848
29974.t000007 (1 of 1) PTHR23139//PTHR23139:SF66 - RNA-BINDING PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 3636   29974: 54221-57856
29999.t000004 (1 of 173) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) R. communis v0.1 1568   29999: 59537-61104
30006.t000002 (1 of 3) PTHR24012:SF490 - UBP1-ASSOCIATED PROTEIN 2C R. communis v0.1 2430   30006: 23258-25687
30008.t000046 (1 of 8) K14411 - RNA-binding protein Musashi (MSI) R. communis v0.1 4144   30008: 210931-215074
30008.t000019 (1 of 18) KOG0131 - Splicing factor 3b, subunit 4 R. communis v0.1 2038   30008: 96600-98637
30032.t000019 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1312   30032: 117818-119129
30048.t000013 (1 of 8) K14411 - RNA-binding protein Musashi (MSI) R. communis v0.1 4692   30048: 266323-271014
30055.t000039 (1 of 3) K13161 - heterogeneous nuclear ribonucleoprotein R (HNRNPR) R. communis v0.1 3949   30055: 251515-255463
30054.t000036 (1 of 1) KOG0110 - RNA-binding protein (RRM superfamily) R. communis v0.1 2659   30054: 228051-230709
30055.t000068 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1976   30055: 358373-360348
30072.t000048 (1 of 1) KOG0145 - RNA-binding protein ELAV/HU (RRM superfamily) R. communis v0.1 6274   30072: 306687-312960
30076.t000004 (1 of 9) KOG0149 - Predicted RNA-binding protein SEB4 (RRM superfamily) R. communis v0.1 1646   30076: 24913-26558
30076.t000011 (1 of 1) KOG0106//KOG0114//KOG0131//KOG0146 - Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily) // Predicted RNA-binding protein (RRM superfamily) // Splicing factor 3b, subunit 4 // RNA-binding protein ETR-3 (RRM superfamily) R. communis v0.1 1179   30076: 60680-61858
30076.t000186 (1 of 2) K13207 - CUG-BP- and ETR3-like factor (CUGBP, BRUNOL, CELF) R. communis v0.1 10134   30076: 1232339-1242472
30078.t000116 (1 of 3) K11294 - nucleolin (NCL, NSR1) R. communis v0.1 2612   30078: 746713-749324
30084.t000002 (1 of 2) PTHR23147//PTHR23147:SF6 - SERINE/ARGININE RICH SPLICING FACTOR // SUBFAMILY NOT NAMED R. communis v0.1 6848   30084: 11493-18340

6966 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
27383.m000159 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
28180.m000395 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
28462.m000127 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
28629.m000549 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29608.m000212 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29633.m000882 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29646.m001075 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29647.m002041 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29727.m000492 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29889.m003323 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29908.m006046 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
29948.m000699 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30008.m000830 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30032.m000469 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30055.m001569 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30055.m001598 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30076.m004622 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30094.m000674 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30131.m007093 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30147.m013835 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30147.m014250 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30152.m002396 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30152.m002412 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30170.m013671 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
30183.m001297 R. communis v0.1 123429142 RNA recognition motif containing protein, putative, expressed 77 5275 Viridiplantae
Cucsa.005270.1 C. sativus v1.0 123429142 RNA recognition motif containing protein, putative, expressed 64 5275 Viridiplantae
Cucsa.043980.1 C. sativus v1.0 123429142 RNA recognition motif containing protein, putative, expressed 64 5275 Viridiplantae
Cucsa.055310.1 C. sativus v1.0 123429142 RNA recognition motif containing protein, putative, expressed 64 5275 Viridiplantae
Cucsa.109630.1 C. sativus v1.0 123429142 RNA recognition motif containing protein, putative, expressed 64 5275 Viridiplantae
Cucsa.117430.2 C. sativus v1.0 123429142 RNA recognition motif containing protein, putative, expressed 64 5275 Viridiplantae