Gene : Tp57577_TGAC_v2_gene21139 T. pratense v2
Defline:  (1 of 1) 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Genomic Order:  393
Name:  ? Tp57577_TGAC_v2_gene21139 Secondary Identifier:  ? PAC:35979225
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene21139 0.5kb upstream 0.5kb upstream 3738 true Tp57577_TGAC_v2_LG1: 2939256-2942993 Trifolium pratense
Tp57577_TGAC_v2_gene21139 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG1: 2942494-2942993 Trifolium pratense
Tp57577_TGAC_v2_gene21139 0.5kb downstream 0.5kb downstream 3738 true Tp57577_TGAC_v2_LG1: 2938756-2942493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG1: 2938756-2939255 Trifolium pratense
Tp57577_TGAC_v2_gene21139 1.0kb upstream 1.0kb upstream 4238 true Tp57577_TGAC_v2_LG1: 2939256-2943493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG1: 2942494-2943493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 1.0kb downstream 1.0kb downstream 4238 true Tp57577_TGAC_v2_LG1: 2938256-2942493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG1: 2938256-2939255 Trifolium pratense
Tp57577_TGAC_v2_gene21139 2.0kb upstream 2.0kb upstream 5238 true Tp57577_TGAC_v2_LG1: 2939256-2944493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG1: 2942494-2944493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 2.0kb downstream 2.0kb downstream 5238 true Tp57577_TGAC_v2_LG1: 2937256-2942493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG1: 2937256-2939255 Trifolium pratense
Tp57577_TGAC_v2_gene21139 5.0kb upstream 5.0kb upstream 8238 true Tp57577_TGAC_v2_LG1: 2939256-2947493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG1: 2942494-2947493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 5.0kb downstream 5.0kb downstream 8238 true Tp57577_TGAC_v2_LG1: 2934256-2942493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG1: 2934256-2939255 Trifolium pratense
Tp57577_TGAC_v2_gene21139 10.0kb upstream 10.0kb upstream 13238 true Tp57577_TGAC_v2_LG1: 2939256-2952493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG1: 2942494-2952493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 10.0kb downstream 10.0kb downstream 13238 true Tp57577_TGAC_v2_LG1: 2929256-2942493 Trifolium pratense
Tp57577_TGAC_v2_gene21139 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG1: 2929256-2939255 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303652 5265 Fabidae View MSA
124070022 5270 Rosid View MSA
123738955 5271 Pentapetalae View MSA
122790203 5272 Eudicot View MSA
122046212 5273 Angiosperm View MSA
121345498 5274 Embryophyte View MSA
123427980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain