Protein Domain : IPR006633

Type:  Domain Name:  Carbohydrate-binding/sugar hydrolysis domain
Description:  The CASH domain is shared by many carbohydrate-binding proteins and sugar hydrolases. The CASH domain is characterised by internal repetitions of glycines and hydrophobic residues that correspond to the repetitive units of a predicted or observed right-handed beta-helix structure of the pectate lyase superfamily. The basic structural unit ofthis family consists of three beta-strands that form a single turn of the beta-helix. Each turn contains ~20 amino acids, and is normally repeated between 7 and 11 times toform the elongated helix structure. The repeats show a low degree of sequence identity when compared with each other. The region of homology with the CASH domain corresponds to the core region of the beta-helix, covering from the second to the sixth repeat []. Short Name:  Carb-bd_sugar_hydrolysis-dom

0 Child Features

3 Contains

DB identifier Type Name
IPR006626 Repeat Parallel beta-helix repeat
IPR007742 Domain Periplasmic copper-binding protein NosD, beta helix domain
IPR022441 Repeat Parallel beta-helix repeat-2

1 Cross References

Identifier
SM00722

1 Found In

DB identifier Type Name
IPR011050 Domain Pectin lyase fold/virulence factor

0 GO Annotation

0 Ontology Annotations

0 Parent Features

159 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
evm.model.supercontig_145.12 PAC:16409065 Carica papaya 516  
orange1.1g010441m A0A067HD77 PAC:18135968 Citrus sinensis 510  
AT2G45220.1 O22149 PAC:19638919 Arabidopsis thaliana 511  
Thhalv10001409m V4KMM2 PAC:20189230 Eutrema salsugineum 511  
Ciclev10019773m V4TDW7 PAC:20810749 Citrus clementina 510  
Lus10038917 PAC:23150632 Linum usitatissimum 537  
Lus10006103 PAC:23174774 Linum usitatissimum 460  
Migut.B01610.1.p PAC:28946745 Mimulus guttatus 523  
Cagra.0239s0075.1.p PAC:28915432 Capsella grandiflora 510  
Glyma.08G044000.2.p K7L4Y6 PAC:30535565 Glycine max 479  
Glyma.08G044000.1.p K7L4Y5 PAC:30535564 Glycine max 526  
Glyma.01G138000.1.p PAC:30542180 Glycine max 515  
Glyma.01G138100.1.p PAC:30544017 Glycine max 515  
Glyma.03G029100.1.p I1JKR8 PAC:30515783 Glycine max 517  
Brara.D02731.1.p A0A397ZRP2 PAC:30623048 Brassica rapa FPsc 511  
Brara.K01158.1.p A0A397KW60 PAC:30640552 Brassica rapa FPsc 216  
Bostr.25993s0252.1.p PAC:30667880 Boechera stricta 510  
Spipo15G0034100 PAC:31507166 Spirodela polyrhiza 519  
AL4G44340.t1 PAC:35925167 Arabidopsis lyrata 511  
Tp57577_TGAC_v2_mRNA33780 PAC:35987768 Trifolium pratense 538  
DCAR_030246 PAC:36073296 Daucus carota 522  
DCAR_015873 PAC:36080727 Daucus carota 515  
Phvul.002G318500.2.p PAC:37177272 Phaseolus vulgaris 353  
Bol029539 A0A3P6ADF5 PAC:37348610 Brassica oleracea capitata 510  
Bol021716 PAC:37343171 Brassica oleracea capitata 510  
Bol030160 PAC:37342968 Brassica oleracea capitata 500  
AT2G45220.1 O22149 PAC:37377027 Arabidopsis thaliana 511  
PGSC0003DMP400045032 PAC:37438139 Solanum tuberosum 516  
evm.model.Scaffold_552.312 PAC:37881988 Coffea arabica 518  
evm.model.Scaffold_552.314 PAC:37882161 Coffea arabica 518  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11852237