Protein Domain : IPR006626

Type:  Repeat Name:  Parallel beta-helix repeat
Description:  The tertiary structures of pectate lyases and rhamnogalacturonase A show a stack of parallel betastrands that are coiled into a large helix. Each coil of the helix represents a structural repeat that, insome homologues, can be recognised from sequence information alone. Conservation ofasparagines might be connected with asparagine-ladders that contribute to the stability of the fold.Proteins containing these repeats most often are enzymes with polysaccharide substrates []. Short Name:  PbH1
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0 Child Features

0 Contains

1 Cross References

Identifier
SM00710

11 Found Ins

DB identifier Type Name
IPR012334 Domain Pectin lyase fold
IPR011050 Domain Pectin lyase fold/virulence factor
IPR000743 Family Glycoside hydrolase, family 28
IPR018082 Family AmbAllergen
IPR002022 Domain Pectate lyase/Amb allergen
IPR006633 Domain Carbohydrate-binding/sugar hydrolysis domain
IPR011459 Domain Domain of unknown function DUF1565
IPR013687 Domain Disaggregatase-related
IPR015331 Domain P22 tailspike C-terminal domain
IPR022442 Domain Parallel beta-helix repeat-containing domain
IPR022388 Family Conserved hypothetical protein CHP03808

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
33909 D8RH98 PAC:15404101 Selaginella moellendorffii 357  
78038 D8QWC7 PAC:15418478 Selaginella moellendorffii 455  
78556 D8QUK0 PAC:15422235 Selaginella moellendorffii 439  
99190 D8RQ82 PAC:15414458 Selaginella moellendorffii 468  
405348 D8QX22 PAC:15412371 Selaginella moellendorffii 601  
105243 D8RYY8 PAC:15413444 Selaginella moellendorffii 469  
111266 D8S8U4 PAC:15408883 Selaginella moellendorffii 410  
33152 D8QQS2 PAC:15420549 Selaginella moellendorffii 393  
124011 D8SSH1 PAC:15423137 Selaginella moellendorffii 445  
89085 D8RB42 PAC:15406353 Selaginella moellendorffii 383  
74934 D8QQS1 PAC:15413742 Selaginella moellendorffii 455  
evm.TU.contig_27928.2 PAC:16429532 Carica papaya 482  
evm.model.supercontig_10.250 PAC:16404616 Carica papaya 386  
evm.model.supercontig_10.252 PAC:16404618 Carica papaya 299  
evm.model.supercontig_10.242 PAC:16404607 Carica papaya 460  
evm.model.supercontig_108.28 PAC:16405442 Carica papaya 471  
evm.model.supercontig_12.214 PAC:16406764 Carica papaya 398  
evm.model.supercontig_125.10 PAC:16407238 Carica papaya 264  
evm.model.supercontig_125.9 PAC:16407295 Carica papaya 444  
evm.model.supercontig_136.8 PAC:16408374 Carica papaya 222  
evm.model.supercontig_14.219 PAC:16408724 Carica papaya 390  
evm.model.supercontig_146.54 PAC:16409145 Carica papaya 494  
evm.model.supercontig_1615.1 PAC:16410225 Carica papaya 405  
evm.model.supercontig_250.7 PAC:16414912 Carica papaya 403  
evm.model.supercontig_250.6 PAC:16414911 Carica papaya 397  
evm.model.supercontig_250.3 PAC:16414908 Carica papaya 309  
evm.model.supercontig_250.4 PAC:16414909 Carica papaya 392  
evm.model.supercontig_259.7 PAC:16415021 Carica papaya 286  
evm.model.supercontig_28.9 PAC:16415989 Carica papaya 415  
evm.model.supercontig_29.51 PAC:16416260 Carica papaya 481  

1 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9724625