Protein Domain : IPR000743

Type:  Family Name:  Glycoside hydrolase, family 28
Description:  O-Glycosyl hydrolases () are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site.Glycoside hydrolase family 28 comprises enzymes with several known activities; polygalacturonase (); exo-polygalacturonase (); exo-polygalacturonase (); rhamnogalacturonase (EC not defined).Polygalacturonase (PG) (pectinase) [, ] catalyses the random hydrolysis of 1,4-alpha-D-galactosiduronic linkages in pectate and other galacturonans. In fruit, polygalacturonase plays an important role in cell wall metabolism during ripening. In plant bacterial pathogens such as Erwinia carotovoraor Ralstonia solanacearum(Pseudomonas solanacearum) and fungal pathogens such as Aspergillus niger, polygalacturonase is involved in maceration and soft-rotting of plant tissue. Exo-poly-alpha-D-galacturonosidase () (exoPG) [] hydrolyses peptic acid from the non-reducing end, releasing digalacturonate. PG and exoPG share a few regions of sequence similarity, and belong to family 28 of the glycosyl hydrolases. Short Name:  Glyco_hydro_28

0 Child Features

2 Contains

DB identifier Type Name
IPR012334 Domain Pectin lyase fold
IPR006626 Repeat Parallel beta-helix repeat

2 Cross Referencess

Identifier
PF00295
PS00502

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0004650 IPR000743
GO:0005975 IPR000743

2 Ontology Annotations

GO Term Gene Name
GO:0004650 IPR000743
GO:0005975 IPR000743

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
33909 D8RH98 PAC:15404101 Selaginella moellendorffii 357  
78038 D8QWC7 PAC:15418478 Selaginella moellendorffii 455  
54363 D8RPJ3 PAC:15417089 Selaginella moellendorffii 392  
102892 D8RVJ7 PAC:15409316 Selaginella moellendorffii 220  
405348 D8QX22 PAC:15412371 Selaginella moellendorffii 601  
105243 D8RYY8 PAC:15413444 Selaginella moellendorffii 469  
113633 D8SD36 PAC:15417766 Selaginella moellendorffii 427  
89085 D8RB42 PAC:15406353 Selaginella moellendorffii 383  
437695 D8QNX5 PAC:15419870 Selaginella moellendorffii 474  
evm.TU.contig_34124.1 PAC:16430397 Carica papaya 310  
evm.TU.contig_35388.1 PAC:16430640 Carica papaya 79  
evm.TU.contig_44131.1 PAC:16431963 Carica papaya 70  
evm.TU.contig_44757.1 PAC:16432074 Carica papaya 70  
evm.model.supercontig_10.230 PAC:16404594 Carica papaya 338  
evm.model.supercontig_10.252 PAC:16404618 Carica papaya 299  
evm.model.supercontig_10.242 PAC:16404607 Carica papaya 460  
evm.model.supercontig_1124.1 PAC:16406008 Carica papaya 97  
evm.model.supercontig_125.10 PAC:16407238 Carica papaya 264  
evm.model.supercontig_125.9 PAC:16407295 Carica papaya 444  
evm.model.supercontig_136.9 PAC:16408384 Carica papaya 108  
evm.model.supercontig_136.8 PAC:16408374 Carica papaya 222  
evm.model.supercontig_151.22 PAC:16409539 Carica papaya 425  
evm.model.supercontig_250.5 PAC:16414910 Carica papaya 153  
evm.model.supercontig_259.7 PAC:16415021 Carica papaya 286  
evm.model.supercontig_28.110 PAC:16415850 Carica papaya 246  
evm.model.supercontig_28.9 PAC:16415989 Carica papaya 415  
evm.model.supercontig_333.3 PAC:16417773 Carica papaya 228  
evm.model.supercontig_333.2 PAC:16417772 Carica papaya 153  
evm.model.supercontig_37.67 PAC:16418741 Carica papaya 415  
evm.model.supercontig_428.6 PAC:16419901 Carica papaya 170  

5 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7624375
            8535779
            2400785
            2193922
            2168372