Protein Domain : IPR022441

Type:  Repeat Name:  Parallel beta-helix repeat-2
Description:  This model represents a tandem pair of an approximately 22-amino acid (each) repeat homologous to the beta-strand repeats that stack in a right-handed parallel beta-helix in the periplasmic C-5 mannuronan epimerase, AlgA, of Pseudomonas aeruginosa. A homology domain consisting of a longer tandem array of these repeats is described in the SMART database as CASH (SM00722), and is found in many carbohydrate-binding proteins and sugar hydrolases. A single repeat is represented by SM00710. This TIGRFAMs model represents a flavor of the parallel beta-helix-forming repeat based on prokaryotic sequences only in its seed alignment, although it also finds many eukaryotic sequences. Short Name:  Para_beta_helix_rpt-2
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0 Child Features

0 Contains

1 Cross References

Identifier
TIGR03804

2 Found Ins

DB identifier Type Name
IPR011050 Domain Pectin lyase fold/virulence factor
IPR006633 Domain Carbohydrate-binding/sugar hydrolysis domain

0 GO Annotation

0 Ontology Annotations

0 Parent Features

4 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
62393 C1MM63 PAC:27347686 Micromonas pusilla CCMP1545 654  
Dusal.1342s00002.2.p PAC:33202142 Dunaliella salina 348  
Dusal.1342s00002.1.p PAC:33202141 Dunaliella salina 349  
Vocar.0003s0483.1.p PAC:32888999 Volvox carteri 1905  

0 Publications