Gene : Thhalv10011739m.g E. salsugineum v1.0

Defline:  (1 of 2) 2.1.1.193 - 16S rRNA (uracil(1498)-N(3))-methyltransferase / M(3)U(1498) specific methyltransferase Genomic Order:  566
Name:  ? Thhalv10011739m.g Secondary Identifier:  ? PAC:20184631

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thhalv10011739m.g 0.5kb upstream 0.5kb upstream 2913 true scaffold_7: 3187580-3190492 Eutrema salsugineum
Thhalv10011739m.g 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 3187580-3188079 Eutrema salsugineum
Thhalv10011739m.g 0.5kb downstream 0.5kb downstream 2913 true scaffold_7: 3188080-3190992 Eutrema salsugineum
Thhalv10011739m.g 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 3190493-3190992 Eutrema salsugineum
Thhalv10011739m.g 1.0kb upstream 1.0kb upstream 3413 true scaffold_7: 3187080-3190492 Eutrema salsugineum
Thhalv10011739m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 3187080-3188079 Eutrema salsugineum
Thhalv10011739m.g 1.0kb downstream 1.0kb downstream 3413 true scaffold_7: 3188080-3191492 Eutrema salsugineum
Thhalv10011739m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 3190493-3191492 Eutrema salsugineum
Thhalv10011739m.g 2.0kb upstream 2.0kb upstream 4413 true scaffold_7: 3186080-3190492 Eutrema salsugineum
Thhalv10011739m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 3186080-3188079 Eutrema salsugineum
Thhalv10011739m.g 2.0kb downstream 2.0kb downstream 4413 true scaffold_7: 3188080-3192492 Eutrema salsugineum
Thhalv10011739m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 3190493-3192492 Eutrema salsugineum
Thhalv10011739m.g 5.0kb upstream 5.0kb upstream 7413 true scaffold_7: 3183080-3190492 Eutrema salsugineum
Thhalv10011739m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 3183080-3188079 Eutrema salsugineum
Thhalv10011739m.g 5.0kb downstream 5.0kb downstream 7413 true scaffold_7: 3188080-3195492 Eutrema salsugineum
Thhalv10011739m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 3190493-3195492 Eutrema salsugineum
Thhalv10011739m.g 10.0kb upstream 10.0kb upstream 12413 true scaffold_7: 3178080-3190492 Eutrema salsugineum
Thhalv10011739m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 3178080-3188079 Eutrema salsugineum
Thhalv10011739m.g 10.0kb downstream 10.0kb downstream 12413 true scaffold_7: 3188080-3200492 Eutrema salsugineum
Thhalv10011739m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 3190493-3200492 Eutrema salsugineum

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376104 5261 Brassicaceae View MSA
123832827 5264 Brassicales-Malvales View MSA
124321826 5266 SBM View MSA
124237321 5268 Malvidae View MSA
124070022 5270 Rosid View MSA
123738955 5271 Pentapetalae View MSA
122790203 5272 Eudicot View MSA
122046212 5273 Angiosperm View MSA
121345498 5274 Embryophyte View MSA
123427980 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain