Protein Domain : IPR002562

Type:  Domain Name:  3'-5' exonuclease domain
Description:  This domain is responsible for the 3'-5' exonuclease proofreading activity of Escherichia coliDNA polymerase I (polI) and other enzymes, it catalyses the hydrolysis of unpaired or mismatched nucleotides. This domain consists of the amino-terminal half of the Klenow fragment in E. coli polI it is also found in the Werner syndrome helicase (WRN), focus forming activity 1 protein (FFA-1) and ribonuclease D (RNase D) [].Werner syndrome is a human genetic disorder causing premature aging; the WRN protein has helicase activity in the 3'-5' direction [, ]. The FFA-1 protein is required for formation of a replication foci and also has helicase activity; it is a homologue of the WRN protein []. RNase D is a 3'-5' exonuclease involved in tRNA processing. Also found in this family is the autoantigen PM/Scl thought to be involved in polymyositis-scleroderma overlap syndrome. Short Name:  3'-5'_exonuclease_dom

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF01612
SM00474

3 Found Ins

DB identifier Type Name
IPR002298 Family DNA polymerase A
IPR018320 Family DNA polymerase 1
IPR006292 Family Ribonuclease D

3 GO Annotations

GO Term Gene Name
GO:0003676 IPR002562
GO:0008408 IPR002562
GO:0006139 IPR002562

3 Ontology Annotations

GO Term Gene Name
GO:0003676 IPR002562
GO:0008408 IPR002562
GO:0006139 IPR002562

1 Parent Features

DB identifier Type Name
IPR012337 Domain Ribonuclease H-like domain

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
100501 D8RS45 PAC:15423179 Selaginella moellendorffii 200  
104837 D8RZE6 PAC:15415070 Selaginella moellendorffii 328  
82310 D8QZ15 PAC:15410421 Selaginella moellendorffii 788  
118004 D8SIQ7 PAC:15405317 Selaginella moellendorffii 184  
48160 D8SJX1 PAC:15420045 Selaginella moellendorffii 201  
84661 D8R4J7 PAC:15418647 Selaginella moellendorffii 512  
122415 D8SQC3 PAC:15420479 Selaginella moellendorffii 442  
evm.model.supercontig_131.11 PAC:16408003 Carica papaya 65  
evm.model.supercontig_157.49 PAC:16409837 Carica papaya 302  
evm.model.supercontig_1834.1 PAC:16411629 Carica papaya 179  
evm.model.supercontig_3.114 PAC:16416385 Carica papaya 493  
evm.model.supercontig_48.138 PAC:16420771 Carica papaya 651  
evm.model.supercontig_87.78 PAC:16427749 Carica papaya 750  
evm.model.supercontig_97.33 PAC:16429068 Carica papaya 937  
29794.m003360 B9RRW2 PAC:16808720 Ricinus communis 342  
30072.m000959 B9SI83 PAC:16816749 Ricinus communis 857  
30098.m001710 B9RPI0 PAC:16817606 Ricinus communis 523  
30128.m008888 B9RFH0 PAC:16818474 Ricinus communis 570  
29629.m001441 B9S9Z0 PAC:16804020 Ricinus communis 149  
29680.m001722 B9S7N5 PAC:16805552 Ricinus communis 776  
29666.m001473 B9SAH0 PAC:16805167 Ricinus communis 963  
29662.m000449 B9SNW3 PAC:16805092 Ricinus communis 211  
29600.m000554 B9SDW9 PAC:16803495 Ricinus communis 977  
Cucsa.337660.1 A0A0A0LFG2 PAC:16978643 Cucumis sativus 211  
Cucsa.337680.1 A0A0A0LBN3 PAC:16978645 Cucumis sativus 209  
Cucsa.337650.1 A0A0A0LHC5 PAC:16978642 Cucumis sativus 210  
Cucsa.395280.1 A0A0A0LN42 PAC:16983352 Cucumis sativus 340  
Cucsa.395280.2 PAC:16983353 Cucumis sativus 333  
Cucsa.395280.3 PAC:16983354 Cucumis sativus 312  
Cucsa.051160.1 PAC:16954183 Cucumis sativus 580  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            9288107
            9697700
            9224595