Protein Domain : IPR008148

Type:  Family Name:  DNA photolyase, class 2
Description:  Deoxyribodipyrimidine photolyase (DNA photolyase) [] is a DNA repair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer. DNA photolyase is an enzyme that requires two choromophore-cofactors for its activity: a reduced FADH2 and either 5,10-methenyltetrahydrofolate (5,10-MTFH) or an oxidized 8-hydroxy-5- deazaflavin (8-HDF) derivative (F420). The folate or deazaflavin chromophore appears to function as an antenna, while the FADH2 chromophore is thought to be responsible for electron transfer. On the basis of sequence similarities [] DNA photolyases can be grouped into two classes. The second class contains enzymes from Myxococcus xanthus, methanogenic archaebacteria, insects, fish and marsupial mammals. It is not yet known what second cofactor is bound to class 2 enzymes. There are a number of conserved sequence regions in all known class 2 DNA photolyases, especially in the C-terminal part. Short Name:  DNA_photolyase_2

0 Child Features

3 Contains

DB identifier Type Name
IPR014729 Domain Rossmann-like alpha/beta/alpha sandwich fold
IPR005101 Domain Cryptochrome/photolyase FAD-binding domain
IPR006050 Domain DNA photolyase, N-terminal

4 Cross Referencess

Identifier
PTHR10211
PS01083
PS01084
TIGR00591

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003904 IPR008148
GO:0006281 IPR008148

2 Ontology Annotations

GO Term Gene Name
GO:0003904 IPR008148
GO:0006281 IPR008148

0 Parent Features

560 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
96351 D8RLP2 PAC:15406949 Selaginella moellendorffii 510  
evm.model.supercontig_29.82 PAC:16416294 Carica papaya 488  
30190.m011036 B9RBT7 PAC:16823398 Ricinus communis 489  
Cucsa.302320.1 Q9AVI6 PAC:16975741 Cucumis sativus 489  
Cucsa.302320.2 PAC:16975742 Cucumis sativus 465  
orange1.1g010783m A0A067F8U9 PAC:18120342 Citrus sinensis 501  
orange1.1g011155m A0A067F8Q8 PAC:18120343 Citrus sinensis 492  
orange1.1g017242m A0A067FKP4 PAC:18120345 Citrus sinensis 375  
orange1.1g012429m A0A067FCA1 PAC:18120344 Citrus sinensis 464  
AT1G12370.1 Q9SB00 PAC:19657720 Arabidopsis thaliana 490  
AT1G12370.2 Q9SB00 PAC:19657719 Arabidopsis thaliana 496  
Thhalv10007458m V4KD05 PAC:20187964 Eutrema salsugineum 495  
Ciclev10019873m V4VLN7 PAC:20809554 Citrus clementina 492  
Ciclev10019819m V4T0L0 PAC:20809553 Citrus clementina 501  
Lus10032195 PAC:23168611 Linum usitatissimum 499  
Lus10024557 PAC:23161618 Linum usitatissimum 499  
Potri.001G116800.5 PAC:27043794 Populus trichocarpa 396  
Potri.001G116800.6 PAC:27043795 Populus trichocarpa 310  
Potri.001G116800.2 U5GVC3 PAC:27043791 Populus trichocarpa 497  
Potri.001G116800.3 PAC:27043792 Populus trichocarpa 400  
Potri.001G116800.1 PAC:27043790 Populus trichocarpa 503  
Potri.001G116800.4 PAC:27043793 Populus trichocarpa 398  
Gorai.003G166800.1 A0A0D2RNW5 PAC:26798020 Gossypium raimondii 498  
35877 I0Z4K4 PAC:27390263 Coccomyxa subellipsoidea C-169 447  
62726 I0Z0P9 PAC:27390930 Coccomyxa subellipsoidea C-169 653  
188781 PAC:27344407 Micromonas pusilla CCMP1545 568  
203258 PAC:27342726 Micromonas pusilla CCMP1545 592  
10516 C1MMC7 PAC:27347506 Micromonas pusilla CCMP1545 431  
55168 C1FDS1 PAC:27398738 Micromonas sp RCC299 579  
58629 C1E6D6 PAC:27395271 Micromonas sp RCC299 645  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2282137
            7813451