Protein Domain : IPR005101

Type:  Domain Name:  Cryptochrome/photolyase FAD-binding domain
Description:  This entry represents a multi-helical domain found C-terminal in cryptochrome proteins and DNA photolyases. It acts as a FAD-binding domain [].Photolyases and cryptochromes are related flavoproteins that bind FAD. Photolyases harness the energy of blue light to repair DNA damage by removing pyrimidine dimers. Cryptochromes are blue light photoreceptors that mediate blue light-induced gene expression. They function as photoreceptors in plants and circadian clock components in animals [, ]. DNA photolyases are DNA repair enzymes that repair mismatched pyrimidine dimers induced by exposure to ultra-violet light. They bind to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), they catalyse dimer splitting, breaking the cyclobutane ring joining the two pyrimidines of the dimer so as to split them into the constituent monomers; this process is called photoreactivation. DNA photolyases require two choromophore-cofactors for their activity. All monomers contain a reduced FAD moiety, and, in addition, either a reduced pterin or 8-hydroxy-5-diazaflavin as a second chromophore. Either chromophore may act as the primary photon acceptor, peak absorptions occurring in the blue region of the spectrum and in the UV-B region, at a wavelength around 290nm [, ]. Short Name:  Cryptochr/Photolyase_FAD-bd

0 Child Features

1 Contains

DB identifier Type Name
IPR018394 Conserved_site Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal

2 Cross Referencess

Identifier
PF03441
SSF48173

3 Found Ins

DB identifier Type Name
IPR002081 Family Cryptochrome/DNA photolyase, class 1
IPR008148 Family DNA photolyase, class 2
IPR019947 Family Deoxyribodipyrimidine photo-lyase, 8-HDF type

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
92414 D8RF17 PAC:15418364 Selaginella moellendorffii 559  
96351 D8RLP2 PAC:15406949 Selaginella moellendorffii 510  
106065 D8S0Z3 PAC:15414906 Selaginella moellendorffii 499  
417535 D8S2S6 PAC:15404454 Selaginella moellendorffii 433  
230376 PAC:15413208 Selaginella moellendorffii 523  
85247 D8R6C0 PAC:15418453 Selaginella moellendorffii 345  
75166 D8QNP6 PAC:15410593 Selaginella moellendorffii 494  
426049 D8SV55 PAC:15404952 Selaginella moellendorffii 987  
evm.model.supercontig_10.218 PAC:16404580 Carica papaya 554  
evm.model.supercontig_244.8 PAC:16414600 Carica papaya 538  
evm.model.supercontig_29.82 PAC:16416294 Carica papaya 488  
evm.model.supercontig_36.135 PAC:16418321 Carica papaya 688  
evm.model.supercontig_44.63 PAC:16420204 Carica papaya 638  
evm.model.supercontig_9.257 PAC:16428154 Carica papaya 468  
29841.m002796 B9RV05 PAC:16810509 Ricinus communis 537  
29895.m000311 B9SZW0 PAC:16812382 Ricinus communis 640  
29908.m006032 PAC:16812855 Ricinus communis 690  
29986.m001623 B9SAS3 PAC:16815121 Ricinus communis 458  
30147.m014194 B9R9Q0 PAC:16820206 Ricinus communis 691  
30190.m011036 B9RBT7 PAC:16823398 Ricinus communis 489  
30628.m000027 B9TH92 PAC:16824514 Ricinus communis 194  
35415.m000018 B9TKL5 PAC:16826603 Ricinus communis 351  
28226.m000847 B9SPQ7 PAC:16800382 Ricinus communis 578  
28226.m000846 B9SPQ6 PAC:16800381 Ricinus communis 576  
Cucsa.004710.1 PAC:16951046 Cucumis sativus 472  
Cucsa.205530.1 A0A0A0K7T5 PAC:16969115 Cucumis sativus 451  
Cucsa.302320.1 Q9AVI6 PAC:16975741 Cucumis sativus 489  
Cucsa.302320.2 PAC:16975742 Cucumis sativus 465  
Cucsa.310860.2 PAC:16976594 Cucumis sativus 591  
Cucsa.310860.1 PAC:16976593 Cucumis sativus 591  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            7604260
            12535521
            15213381
            15299148