Protein Domain : IPR002081

Type:  Family Name:  Cryptochrome/DNA photolyase, class 1
Description:  Deoxyribodipyrimidine photolyase (DNA photolyase) [] is a DNArepair enzyme. It binds to UV-damaged DNA containing pyrimidine dimers and, upon absorbing a near-UV photon (300 to 500 nm), breaks the cyclobutane ring joining the two pyrimidines of the dimer. DNA photolyase is an enzyme that requires two choromophore-cofactors for its activity: a reduced FADH2 and either 5,10-methenyltetrahydrofolate (5,10-MTFH) or an oxidized 8-hydroxy-5-deazaflavin (8-HDF) derivative (F420). The folate or deazaflavin chromophore appears to function as an antenna, while the FADH2 chromophore is thought to be responsible for electron transfer.On the basis of sequence similarities DNA photolyases can be grouped into two classes []. The first class contains enzymes from eubacteria, the halophilic archaebacteria Halobacterium salinarium(Halobacterium halobium), fungi and plants. Class 1 enzymes bind either 5,10-MTHF (Escherichia coli, fungi, etc.) or 8-HDF (Streptomyces griseus, Halobacterium halobium) [, ]. The second class contains DNA photolyases from higher eukaryotes, methanobacteria and eubacteria.This family also includes plant cryptochromes 1 (CRY1) and 2 (CRY2), which are blue light photoreceptors that mediate blue light-induced geneexpression. Short Name:  Cryptochrome/DNA_photolyase_1

3 Child Features

DB identifier Type Name
IPR014134 Family Cryptochrome, plant
IPR014133 Family Cryptochrome, DASH
IPR019947 Family Deoxyribodipyrimidine photo-lyase, 8-HDF type

5 Contains

DB identifier Type Name
IPR014729 Domain Rossmann-like alpha/beta/alpha sandwich fold
IPR005101 Domain Cryptochrome/photolyase FAD-binding domain
IPR006050 Domain DNA photolyase, N-terminal
IPR020978 Domain Cryptochrome C-terminal
IPR018394 Conserved_site Cryptochrome/DNA photolyase, class 1 conserved site, C-terminal

1 Cross References

Identifier
PR00147

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003913 IPR002081
GO:0006281 IPR002081

2 Ontology Annotations

GO Term Gene Name
GO:0003913 IPR002081
GO:0006281 IPR002081

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
92414 D8RF17 PAC:15418364 Selaginella moellendorffii 559  
106065 D8S0Z3 PAC:15414906 Selaginella moellendorffii 499  
230376 PAC:15413208 Selaginella moellendorffii 523  
75166 D8QNP6 PAC:15410593 Selaginella moellendorffii 494  
evm.model.supercontig_244.8 PAC:16414600 Carica papaya 538  
evm.model.supercontig_36.135 PAC:16418321 Carica papaya 688  
evm.model.supercontig_44.63 PAC:16420204 Carica papaya 638  
29895.m000311 B9SZW0 PAC:16812382 Ricinus communis 640  
29908.m006032 PAC:16812855 Ricinus communis 690  
28226.m000847 B9SPQ7 PAC:16800382 Ricinus communis 578  
28226.m000846 B9SPQ6 PAC:16800381 Ricinus communis 576  
Cucsa.310860.2 PAC:16976594 Cucumis sativus 591  
Cucsa.310860.1 PAC:16976593 Cucumis sativus 591  
Cucsa.311460.1 A0A0A0LDY1 PAC:16976688 Cucumis sativus 681  
Cucsa.311460.2 PAC:16976689 Cucumis sativus 612  
orange1.1g005723m A0A067GZR5 PAC:18108459 Citrus sinensis 681  
orange1.1g005725m A0A067GZR5 PAC:18108460 Citrus sinensis 681  
orange1.1g005710m A0A067GZR5 PAC:18108461 Citrus sinensis 681  
orange1.1g044814m A0A067FUY0 PAC:18109060 Citrus sinensis 577  
orange1.1g006464m A0A067F285 PAC:18120596 Citrus sinensis 644  
orange1.1g006521m A0A067ER57 PAC:18120597 Citrus sinensis 642  
AT4G08920.1 Q43125 PAC:19647949 Arabidopsis thaliana 681  
AT5G24850.1 PAC:19669453 Arabidopsis thaliana 526  
AT1G04400.1 Q96524 PAC:19652474 Arabidopsis thaliana 612  
AT1G04400.2 Q96524 PAC:19652475 Arabidopsis thaliana 612  
Thhalv10003169m V4NF43 PAC:20208192 Eutrema salsugineum 612  
Thhalv10007081m V4KFG5 PAC:20187279 Eutrema salsugineum 621  
Thhalv10007080m V4KFG5 PAC:20187280 Eutrema salsugineum 621  
Thhalv10003995m V4KXB4 PAC:20199504 Eutrema salsugineum 523  
Ciclev10000591m V4T717 PAC:20786677 Citrus clementina 626  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            2282137
            7813451
            2501760
            15721603