Protein Domain : IPR001294

Type:  Family Name:  Phytochrome
Description:  Phytochrome belongs to a family of plant photoreceptors that mediate physiological and developmental responses to changes in red and far-red light conditions [].The protein undergoes reversible photochemical conversion between a biologically-inactive red light-absorbing form and the active far-red light-absorbing form. Phytochrome is a dimer of identical 124 kDa subunits, each of which contains a linear tetrapyrrole chromophore, covalently-attached via a Cys residue.In Arabidopsis thaliana, there are genes for at least five phytochrome proteins [].These photoreceptors control such responses as germination, stem elongation, flowering, gene expression, and chloroplast and leaf development. It is not yet known which red light responses are controlled by which phytochrome species, or whether the different phytochromes have overlapping functions []. Synechocystis sp.(strain PCC 6803) hypothetical protein slr0473 contains a domain similar to that of plants phytochrome and seems also to bind a chromophore. Short Name:  Phytochrome

2 Child Features

DB identifier Type Name
IPR012129 Family Phytochrome A/B/C/D/E
IPR009219 Family Bacteriophytochrome, CheY-like

9 Contains

DB identifier Type Name
IPR003594 Domain Histidine kinase-like ATPase, C-terminal domain
IPR003661 Domain Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
IPR013515 Domain Phytochrome, central region
IPR003018 Domain GAF domain
IPR000014 Domain PAS domain
IPR016132 Domain Phytochrome chromophore attachment domain
IPR013654 Domain PAS fold-2
IPR013767 Domain PAS fold
IPR013516 Binding_site Phytochrome chromophore binding site

1 Cross References

Identifier
PR01033

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0006355 IPR001294
GO:0009584 IPR001294

2 Ontology Annotations

GO Term Gene Name
GO:0006355 IPR001294
GO:0009584 IPR001294

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
161430 D8T691 PAC:15401681 Selaginella moellendorffii 1143  
evm.model.supercontig_136.26 PAC:16408315 Carica papaya 286  
evm.model.supercontig_17.112 PAC:16410603 Carica papaya 1112  
evm.model.supercontig_48.231 PAC:16420875 Carica papaya 986  
evm.model.supercontig_9.55 PAC:16428321 Carica papaya 664  
29693.m002076 B9S180 PAC:16806046 Ricinus communis 1131  
29889.m003301 B9RZR1 PAC:16812248 Ricinus communis 1141  
30128.m008997 B9RFS7 PAC:16818581 Ricinus communis 1124  
Cucsa.005340.1 PAC:16951131 Cucumis sativus 1148  
Cucsa.005370.1 A0A0A0KJ32 PAC:16951135 Cucumis sativus 1123  
Cucsa.005370.2 PAC:16951136 Cucumis sativus 978  
Cucsa.100300.1 A0A0A0K6F8 PAC:16958550 Cucumis sativus 1119  
Cucsa.212560.1 PAC:16969357 Cucumis sativus 1123  
Cucsa.252520.1 A0A0A0L825 PAC:16971956 Cucumis sativus 1132  
orange1.1g002210m A0A067DDU1 PAC:18132623 Citrus sinensis 953  
orange1.1g005722m A0A067DPT2 PAC:18132624 Citrus sinensis 681  
orange1.1g001215m A0A067DR09 PAC:18132622 Citrus sinensis 1122  
orange1.1g002191m A0A067GRT1 PAC:18112278 Citrus sinensis 955  
orange1.1g001210m A0A067GEJ2 PAC:18112275 Citrus sinensis 1123  
orange1.1g001353m A0A067GE87 PAC:18112276 Citrus sinensis 1093  
orange1.1g002152m A0A067GH87 PAC:18112277 Citrus sinensis 959  
orange1.1g037299m A0A067G8U7 PAC:18109781 Citrus sinensis 1111  
orange1.1g001564m A0A067EMQ0 PAC:18129991 Citrus sinensis 1052  
orange1.1g001235m A0A067EYQ3 PAC:18129990 Citrus sinensis 1117  
AT4G16250.1 P42497 PAC:19646074 Arabidopsis thaliana 1164  
AT4G18130.1 P42498 PAC:19648944 Arabidopsis thaliana 1112  
AT5G35840.1 P14714 PAC:19673064 Arabidopsis thaliana 1111  
AT1G09570.2 P14712 PAC:19658069 Arabidopsis thaliana 1014  
AT1G09570.1 P14712 PAC:19658068 Arabidopsis thaliana 1122  
AT2G18790.1 P14713 PAC:19641421 Arabidopsis thaliana 1172  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1812812
            2606345
            8453299