Gene : Glyma.04G188900 G. max Wm82.a2.v1
Defline:  (1 of 31) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Genomic Order:  1889
Name:  ? Glyma.04G188900 Secondary Identifier:  ? PAC:30487439
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G188900 0.5kb upstream 0.5kb upstream 3667 true Chr04: 45982482-45986148 Glycine max
Glyma.04G188900 0.5kb upstream 0.5kb upstream 500 false Chr04: 45982482-45982981 Glycine max
Glyma.04G188900 0.5kb downstream 0.5kb downstream 3667 true Chr04: 45982982-45986648 Glycine max
Glyma.04G188900 0.5kb downstream 0.5kb downstream 500 false Chr04: 45986149-45986648 Glycine max
Glyma.04G188900 1.0kb upstream 1.0kb upstream 4167 true Chr04: 45981982-45986148 Glycine max
Glyma.04G188900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 45981982-45982981 Glycine max
Glyma.04G188900 1.0kb downstream 1.0kb downstream 4167 true Chr04: 45982982-45987148 Glycine max
Glyma.04G188900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 45986149-45987148 Glycine max
Glyma.04G188900 2.0kb upstream 2.0kb upstream 5167 true Chr04: 45980982-45986148 Glycine max
Glyma.04G188900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 45980982-45982981 Glycine max
Glyma.04G188900 2.0kb downstream 2.0kb downstream 5167 true Chr04: 45982982-45988148 Glycine max
Glyma.04G188900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 45986149-45988148 Glycine max
Glyma.04G188900 5.0kb upstream 5.0kb upstream 8167 true Chr04: 45977982-45986148 Glycine max
Glyma.04G188900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 45977982-45982981 Glycine max
Glyma.04G188900 5.0kb downstream 5.0kb downstream 8167 true Chr04: 45982982-45991148 Glycine max
Glyma.04G188900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 45986149-45991148 Glycine max
Glyma.04G188900 10.0kb upstream 10.0kb upstream 13167 true Chr04: 45972982-45986148 Glycine max
Glyma.04G188900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 45972982-45982981 Glycine max
Glyma.04G188900 10.0kb downstream 10.0kb downstream 13167 true Chr04: 45982982-45996148 Glycine max
Glyma.04G188900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 45986149-45996148 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314402 5265 Fabidae View MSA
124072827 5270 Rosid View MSA
123746466 5271 Pentapetalae View MSA
122797152 5272 Eudicot View MSA
122048974 5273 Angiosperm View MSA
121311194 5274 Embryophyte View MSA
123348523 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.20868 0.0 4.15613    
cufflinks 3.26214 0.0 9.83583    
cufflinks 0.785046 0.0 2.79761   Low
cufflinks 3.60439 0.0 10.6984    
cufflinks 9.83178 0.0 26.5281   High
cufflinks 8.7674 0.0 23.8084   High
cufflinks 1.09758 0.0 3.8101   Low
cufflinks 3.10374 0.0 9.40718    
cufflinks 9.67095 0.0 26.1087   High
cufflinks 1.816        
cufflinks 0.746        
cufflinks 0.761        
cufflinks 3.66       High
cufflinks 5.95       High
cufflinks 2.964        
cufflinks 1.869        
cufflinks 0.504       Low
cufflinks 0.611       Low
cufflinks 1.798        
cufflinks 3.521       High
cufflinks 0.95        
cufflinks 2.222        
cufflinks 0.557       Low
cufflinks 0.509       Low
cufflinks 2.294        
cufflinks 1.284        

0 Strain