Gene : Glyma.12G165900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13112:SF0 - FI21285P1 Genomic Order:  1659
Name:  ? Glyma.12G165900 Secondary Identifier:  ? PAC:30545824
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.12G165900 0.5kb upstream 0.5kb upstream 6790 true Chr12: 32018380-32025169 Glycine max
Glyma.12G165900 0.5kb upstream 0.5kb upstream 500 false Chr12: 32018380-32018879 Glycine max
Glyma.12G165900 0.5kb downstream 0.5kb downstream 6790 true Chr12: 32018880-32025669 Glycine max
Glyma.12G165900 0.5kb downstream 0.5kb downstream 500 false Chr12: 32025170-32025669 Glycine max
Glyma.12G165900 1.0kb upstream 1.0kb upstream 7290 true Chr12: 32017880-32025169 Glycine max
Glyma.12G165900 1.0kb upstream 1.0kb upstream 1000 false Chr12: 32017880-32018879 Glycine max
Glyma.12G165900 1.0kb downstream 1.0kb downstream 7290 true Chr12: 32018880-32026169 Glycine max
Glyma.12G165900 1.0kb downstream 1.0kb downstream 1000 false Chr12: 32025170-32026169 Glycine max
Glyma.12G165900 2.0kb upstream 2.0kb upstream 8290 true Chr12: 32016880-32025169 Glycine max
Glyma.12G165900 2.0kb upstream 2.0kb upstream 2000 false Chr12: 32016880-32018879 Glycine max
Glyma.12G165900 2.0kb downstream 2.0kb downstream 8290 true Chr12: 32018880-32027169 Glycine max
Glyma.12G165900 2.0kb downstream 2.0kb downstream 2000 false Chr12: 32025170-32027169 Glycine max
Glyma.12G165900 5.0kb upstream 5.0kb upstream 11290 true Chr12: 32013880-32025169 Glycine max
Glyma.12G165900 5.0kb upstream 5.0kb upstream 5000 false Chr12: 32013880-32018879 Glycine max
Glyma.12G165900 5.0kb downstream 5.0kb downstream 11290 true Chr12: 32018880-32030169 Glycine max
Glyma.12G165900 5.0kb downstream 5.0kb downstream 5000 false Chr12: 32025170-32030169 Glycine max
Glyma.12G165900 10.0kb upstream 10.0kb upstream 16290 true Chr12: 32008880-32025169 Glycine max
Glyma.12G165900 10.0kb upstream 10.0kb upstream 10000 false Chr12: 32008880-32018879 Glycine max
Glyma.12G165900 10.0kb downstream 10.0kb downstream 16290 true Chr12: 32018880-32035169 Glycine max
Glyma.12G165900 10.0kb downstream 10.0kb downstream 10000 false Chr12: 32025170-32035169 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041498 5273 Angiosperm View MSA
122300753 5265 Fabidae View MSA
124070961 5270 Rosid View MSA
123750498 5271 Pentapetalae View MSA
122788511 5272 Eudicot View MSA
121351189 5274 Embryophyte View MSA
123425600 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.8977 0.0 42.7152    
cufflinks 14.9185 0.0 40.0063    
cufflinks 22.1368 0.0 60.7948 High High
cufflinks 18.4447 0.0 49.9438    
cufflinks 9.76152 0.0 26.064   Low
cufflinks 14.8816 0.0 39.9034    
cufflinks 19.9457 0.0 54.165    
cufflinks 16.3958 0.0 44.144    
cufflinks 11.6865 0.0 31.1865   Low
cufflinks 7.13        
cufflinks 4.002       Low
cufflinks 9.721     High High
cufflinks 5.896        
cufflinks 5.308        
cufflinks 3.365       Low
cufflinks 7.035        
cufflinks 3.953       Low
cufflinks 10.81     High High
cufflinks 9.593     High High
cufflinks 8.129     High  
cufflinks 4.278       Low
cufflinks 9.106     High High
cufflinks 6.813        
cufflinks 4.867        
cufflinks 7.672     High  
cufflinks 4.24       Low

0 Strain