Protein Family : Smg-4/UPF3 family protein 123750498

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  82

82 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29765.t000010 (1 of 1) PTHR13112//PTHR13112:SF0 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN // FI21285P1 R. communis v0.1 7573   29765: 93552-101124
30170.t000145 (1 of 1) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN // SUBFAMILY NOT NAMED R. communis v0.1 3908   30170: 4653417-4657324
Cucsa.061690 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. sativus v1.0 6964   scaffold00651: 183865-190828
orange1.1g010224m.g (1 of 1) PTHR13112:SF0 - FI21285P1 C. sinensis v1.1 8458   scaffold00792: 12384-20841
orange1.1g009733m.g (1 of 1) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. sinensis v1.1 6620   scaffold00363: 98421-105040
AT1G33980 (1 of 1) K14328 - regulator of nonsense transcripts 3 (UPF3, RENT3) A. thaliana TAIR10 UPF3 3431   Chr1: 12351593-12355023
Thhalv10007455m.g (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN E. salsugineum v1.0 3838   scaffold_5: 1136822-1140659
Ciclev10000901m.g (1 of 1) PTHR13112:SF0 - FI21285P1 C. clementina v1.0 8767   scaffold_5: 4461971-4470737
Ciclev10019695m.g (1 of 4) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. clementina v1.0 7122   scaffold_3: 19310540-19317661
Lus10003510.g (1 of 2) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN L. usitatissimum v1.0 1876   scaffold144: 27942-29817
Lus10037346.g (1 of 3) PTHR13112:SF0 - FI21285P1 L. usitatissimum v1.0 3955   scaffold462: 1423142-1427096
Lus10035769.g (1 of 3) PTHR13112:SF0 - FI21285P1 L. usitatissimum v1.0 4528   scaffold464: 1268974-1273501
Lus10009488.g (1 of 2) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN L. usitatissimum v1.0 2516   scaffold981: 356835-359350
Gorai.008G045900 (1 of 2) PTHR13112:SF0 - FI21285P1 G. raimondii v2.1 6349   Chr08: 6206289-6212637
Gorai.010G229700 (1 of 2) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN G. raimondii v2.1 5794   Chr10: 60134003-60139796
Gorai.005G265700 (1 of 2) PTHR13112:SF0 - FI21285P1 G. raimondii v2.1 5786   Chr05: 63895783-63901568
Thecc1EG006150 (1 of 1) PTHR13112//PTHR13112:SF0 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN // FI21285P1 T. cacao v1.1 6099   scaffold_2: 981167-987265
Thecc1EG028841 (1 of 1) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN // SUBFAMILY NOT NAMED T. cacao v1.1 13490   scaffold_6: 18791650-18805139
Migut.N00848 (1 of 2) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN M. guttatus v2.0 8339   scaffold_14: 5290122-5298460
Migut.B00752 (1 of 2) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN M. guttatus v2.0 6959   scaffold_2: 4264224-4271182
Araha.25545s0002 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN A. halleri v1.1 2823   Scaffold25545: 1490-4312
Cagra.6333s0004 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN C. grandiflora v1.1 3515   Scaffold6333: 17986-21500
Glyma.06G324500 (1 of 3) PTHR13112//PTHR13112:SF3 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN G. max Wm82.a2.v1 9560   Chr06: 51224621-51234180
Glyma.12G165900 (1 of 2) PTHR13112:SF0 - FI21285P1 G. max Wm82.a2.v1 6290   Chr12: 32018880-32025169
Glyma.16G002300 (1 of 2) PTHR13112:SF0 - FI21285P1 G. max Wm82.a2.v1 6771   Chr16: 114807-121577
Brara.H00556 (1 of 3) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. rapa FPsc v1.3 3126   A08: 6712219-6715344
Brara.E01837 (1 of 3) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. rapa FPsc v1.3 3026   A05: 14837732-14840757
Brara.C00968 (1 of 3) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. rapa FPsc v1.3 3258   A03: 4549343-4552600
Bostr.1040s0004 (1 of 1) PTHR13112 - UPF3 REGULATOR OF NONSENSE TRANSCRIPTS-LIKE PROTEIN B. stricta v1.2 3603   Scaffold1040: 62674-66276
Medtr2g005600 (1 of 1) PTHR13112:SF0 - FI21285P1 M. truncatula Mt4.0v1 5498   chr2: 225129-230626

82 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.061690.1 C. sativus v1.0 123750498 Smg-4/UPF3 family protein 1 5271 Pentapetalae
orange1.1g009733m C. sinensis v1.1 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Thhalv10007455m E. salsugineum v1.0 123750498 Smg-4/UPF3 family protein 1 5271 Pentapetalae
Ciclev10019695m C. clementina v1.0 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Lus10003510 L. usitatissimum v1.0 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
Gorai.008G045900.1 G. raimondii v2.1 123750498 Smg-4/UPF3 family protein 3 5271 Pentapetalae
Thecc1EG028841t3 T. cacao v1.1 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Bostr.1040s0004.1.p B. stricta v1.2 123750498 Smg-4/UPF3 family protein 1 5271 Pentapetalae
SapurV1A.0225s0380.1.p S. purpurea v1.0 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
SapurV1A.0942s0050.1.p S. purpurea v1.0 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
Kalax.0541s0015.1.p K. laxiflora v1.1 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
Kalax.0023s0106.1.p K. laxiflora v1.1 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
Kalax.0008s0066.1.p K. laxiflora v1.1 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
Kaladp0022s0140.1.p K. fedtschenkoi v1.1 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Kaladp0001s0281.1.p K. fedtschenkoi v1.1 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA26375 T. pratense v2 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Tp57577_TGAC_v2_mRNA30254 T. pratense v2 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
DCAR_029162 D. carota v2.0 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Solyc01g103420.2.1 S. lycopersicum ITAG2.4 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Solyc10g044450.1.1 S. lycopersicum ITAG2.4 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Phvul.005G000800.1.p P. vulgaris v2.1 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Potri.019G077500.1.p P. trichocarpa v3.1 123750498 Smg-4/UPF3 family protein 3 5271 Pentapetalae
Podel.19G080800.1.p P. deltoides WV94 v2.1 123750498 Smg-4/UPF3 family protein 3 5271 Pentapetalae
PGSC0003DMP400043138 S. tuberosum v4.03 123750498 Smg-4/UPF3 family protein 1 5271 Pentapetalae
Oeu043625.3 O. europaea v1.0 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
Oeu045913.1 O. europaea v1.0 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
VIT_218s0075g00710.1 V. vinifera v2.1 123750498 Smg-4/UPF3 family protein 3 5271 Pentapetalae
Lsat_1_v5_gn_9_119700.1 L. sativa V8 123750498 Smg-4/UPF3 family protein 2 5271 Pentapetalae
MD15G1438000 M. domestica v1.1 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae
MD08G1243800 M. domestica v1.1 123750498 Smg-4/UPF3 family protein 4 5271 Pentapetalae