Gene : Glyma.06G324000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23139//PTHR23139:SF61 - RNA-BINDING PROTEIN Genomic Order:  3240
Name:  ? Glyma.06G324000 Secondary Identifier:  ? PAC:30550100
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G324000 0.5kb upstream 0.5kb upstream 6043 true Chr06: 51170977-51177019 Glycine max
Glyma.06G324000 0.5kb upstream 0.5kb upstream 500 false Chr06: 51170977-51171476 Glycine max
Glyma.06G324000 0.5kb downstream 0.5kb downstream 6043 true Chr06: 51171477-51177519 Glycine max
Glyma.06G324000 0.5kb downstream 0.5kb downstream 500 false Chr06: 51177020-51177519 Glycine max
Glyma.06G324000 1.0kb upstream 1.0kb upstream 6543 true Chr06: 51170477-51177019 Glycine max
Glyma.06G324000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 51170477-51171476 Glycine max
Glyma.06G324000 1.0kb downstream 1.0kb downstream 6543 true Chr06: 51171477-51178019 Glycine max
Glyma.06G324000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 51177020-51178019 Glycine max
Glyma.06G324000 2.0kb upstream 2.0kb upstream 7543 true Chr06: 51169477-51177019 Glycine max
Glyma.06G324000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 51169477-51171476 Glycine max
Glyma.06G324000 2.0kb downstream 2.0kb downstream 7543 true Chr06: 51171477-51179019 Glycine max
Glyma.06G324000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 51177020-51179019 Glycine max
Glyma.06G324000 5.0kb upstream 5.0kb upstream 10543 true Chr06: 51166477-51177019 Glycine max
Glyma.06G324000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 51166477-51171476 Glycine max
Glyma.06G324000 5.0kb downstream 5.0kb downstream 10543 true Chr06: 51171477-51182019 Glycine max
Glyma.06G324000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 51177020-51182019 Glycine max
Glyma.06G324000 10.0kb upstream 10.0kb upstream 15543 true Chr06: 51161477-51177019 Glycine max
Glyma.06G324000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 51161477-51171476 Glycine max
Glyma.06G324000 10.0kb downstream 10.0kb downstream 15543 true Chr06: 51171477-51187019 Glycine max
Glyma.06G324000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 51177020-51187019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311878 5265 Fabidae View MSA
124065257 5270 Rosid View MSA
123749949 5271 Pentapetalae View MSA
122795253 5272 Eudicot View MSA
122050030 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349493 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.602 0.0 126.896 High  
cufflinks 28.8193 0.0 114.701 High  
cufflinks 31.5123 0.0 123.923 High  
cufflinks 22.5946 0.0 88.0919 High  
cufflinks 32.9944 0.0 135.033 High High
cufflinks 18.2372 0.0 70.0615   Low
cufflinks 24.731 0.0 96.2801 High  
cufflinks 29.509 0.0 122.107 High  
cufflinks 22.0558 0.0 85.2667 High  
cufflinks 3.235        
cufflinks 0.992       Low
cufflinks 3.986        
cufflinks 5.134        
cufflinks 6.683     High High
cufflinks 1.871        
cufflinks 4.627        
cufflinks 2.142        
cufflinks 3.856        
cufflinks 5.624        
cufflinks 4.916        
cufflinks 1.505       Low
cufflinks 5.196        
cufflinks 5.395        
cufflinks 1.459       Low
cufflinks 4.61        
cufflinks 2.641        

0 Strain